Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2760 ATGAGCGTTATCGACATTCTAACCAGAGTTGATTCGATCTGCAAGAAGTACGACAAATACGACGTCGACAAGCACAAGGATTCCAATATCTCCGGTGATGATGCTTTTGCTCGACTCTACGCCGTAGTCGAAGCCGACATCGAGGCAGCTCTCGAGAAAGCAGAAACTGCTTCCAAGGAGAAAAGTAGGGCATCTGTTGTGGCCATCAATGCTGAGATTCGTCGTACTAAGGCTCGGTTGCTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCCGTAAAGAAGGTAAAAGGGCTTTCATCAGAAGAATTTGCTGCTCGTAATGATCTAGTTCTTGTACTGCCAGAGAGGATCCATGCTATCCCAGATGGTACCCCTGCTGCACCCAAAAAAACAGGAGGTTGGGCTGCTTCTGCTTCACGTACTGAAATTAGGTTTGATTCAGATGGTCAATTTGACGGTGAATACTTTCAACAAACTGAGGAATCAAGTAAATTCCGGCAAGAGTTTGAAATGCGTAAAATGAAGCAGGATGAAGGTTTGGATATGATTGCAGAAGGCTTGGATACATTGAAAAACATGGCACACGATATGAATGAGGAACTAGATAGACAAGTTCCACTAATGGATGAGATTGACGCGAAGGTGGACAAAGCATCATCTGACCTAAAGAATACCAATGTCAGGCTTAAAGACACAGTGAACCAGCTTCGATCCAGTCGAAATTTCTGCATTGACATTGTGCTGTTGATTATAATTTTGGGAATTGCTGCCTATTTGTACAATGTGCTGAAGAAATGA 798 0.4398 MSVIDILTRVDSICKKYDKYDVDKHKDSNISGDDAFARLYAVVEADIEAALEKAETASKEKSRASVVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSEEFAARNDLVLVLPERIHAIPDGTPAAPKKTGGWAASASRTEIRFDSDGQFDGEYFQQTEESSKFRQEFEMRKMKQDEGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDAKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2760 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Prci1g2760 265 Gene3D - 170 231 - -
Prci1g2760 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Prci1g2760 265 SUPERFAMILY SNARE fusion complex 165 230 - -
Prci1g2760 265 CDD SNARE_Qc 175 230 - -
Prci1g2760 265 Pfam SNARE domain 207 256 IPR000727 -
Prci1g2760 265 PANTHER SYNTAXIN 46 252 IPR045242 -
Prci1g2760 265 FunFam Putative syntaxin-71-like 170 231 - -
Prci1g2760 265 SMART tSNARE_6 165 232 IPR000727 -
Prci1g2760 265 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2760 Prci-Chr1 46588650 46591748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2760 1 264 SNARE and Associated Proteins AT3G09740 77.820 8.60e-156 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2760 K08506 - mof:131168608 447.973