LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g2749	ATGTTGCTAATTTCCAGCGTATTCTCAACTATCATCTTTATCCCCTTCGCATTGTTTCTCTGCTTCACCAGCTGCGTCTTTACAGTCGCCATCACTGAATTCGACTTCGGCACTTTAACTTTAAGCAGTCTCAAACTCCTCGGAGATGCTCACTTGGACAATGAAAGTGTCAGGCTCACAAGGGATCTCGCCGTCCCCAACTCTGGTTCCGGCAGAGCTCTCTACTCCAAACCCGTCAGATTCAGGCAACCCGGCACTCACAATCCGGCGAGTTTTAATACCTATTTCTCCTTTTCAATTACTAATCTGAATCCATCCTCCATTGGTGGGGGAATCGCTTTTCTAATGGCGCCGGATGCTGAGACCCTCGGTGACGCCGGCGGCTTCCTTGGCCTCCTTAAAGCGGATGGCTCTTCCTCGGGTTTTCTGGCGGTGGAATTCGACACTCAAATGGATGTAGAGTTCAAAGACATTAATGGAAATCATGTGGGTCTGGACCTGAATAGTATGGTTTCGACACATGTTGGCGACCTGGAATCTGTTGGAATCGATCTAAAAAGTGGCGATCTTGTAAACGCATGGATCGAATACAACGGCTCAACAAAGGGCTTTAACATCTGGGTTTCCTACTCAAACATTAGACCAAAAGATCCCCTCCTCTCATTCGATCTCGATCTCGATCAGTACGTAAATGACTTGATGTACGTGGGTTTCTCCGGCTCTACGCAGGGAAGCACGGAGGTCCACAGCATATCGTGGTGGAGCTTTAGCTCGTCCTTCGACTCCAATTCGCCTTCCGGATTGGGTTCATCGGTTCCGCCGTCGCCTCCAACTTTAAGTACGATGAACTCAACTGCCAGTTCCGTGAAGTCGGCACCTCCTTCATTGGCTCCTGCAGCTTCGAATACTCAACCAGAGAATACTAAATCGACCTGTCACAACGAGATCTGTAAGCAAAATCCTGGAGCCGTCGCGGGGGTTGTGACGGCGGGGGCTTTCGTTTTAGCTTTGTTCGCCGGTGCATTCATTTGGGTGTGCTCAAAAAAGATCAAACACGTTAAGAAGTCCGAGTCACTTGCCTCAGAAATCATAAAAATGCCAAAAGAATTTAGTTACAAGGAGCTCAAATCAGCCACCAAGTGCTTCAATGCCAATAGAATTATTGGTCATGGCGCTTTTGGAACTGTGTACAAGGGTATATTGCCAGAGAACGGCGACATCATCGCGGTGAAGAGATGCAGCCACAGTAGTCAGGGGAAGAACGAATTCTTATCTGAATTGTCCATAATCGGGTCTCTCAGACATCGGAATCTTGTTCGTCTTCAAGGATGGTGCCACGAGCAAGGTGAAATCTTATTAGTCTACGACTTAATGCCCAATGGGAGTCTAGATAAAGCGTTATTCGAGGCCCGGACACCTCTACCATGGCCGCACAGGCTTAAAATTTTGTTAGGCGTTGCCTCAGCCCTCGCATATCTGCATCAAGAGTGCGAAAACCAGGTAATTCACAGAGACGTGAAGACAAGTAACATAATGTTAGACGAAGGGTTCAATGCCCGGCTGGGCGATTTTGGTTTAGCTCGTCAAACAGAACACGACAAGTCGCCCGATGCTACGGTGGCGGCGGGGACAATGGGGTATCTGGCACCGGAGTATCTCCTCACAGGTAGAGCCACAGAGAAAACTGATATATTCAGTTACGGTGCGGTGGTTCTGGAAGTGGCCTGCGGAAGAAGACCCATTGAGAAAGATGCGAATGGAGCTGGTAAGGTAGGGGTGAGCAGTAATCTGGTGGAGTGGGTATGGAATATGCACAGAGAAGGGAGGTTGCTAATGGCGGCCGATGCGAGGCTGTGCGGTGAGTTCGACGAAGCAGAGATGAGGAGGGTGCTATTAGTCGGGCTGGCCTGCTCACAGCCCGACCCGTTTAACAGGCCCACGATGAGGACGGTGGTTCAGATGTTGGTGGGTGAAGCCGACGTCCCGATTGTTCCGAGGACTAAGCCAGCCACTAGTTACAGCACATCCCACCTCTTAATGAACTTACAGGACAGCGTTTCAGACGGCAACGGCGTAATCGCCGTCACTTCCTCCTCGTCAGACAACAGCTCCAACGTTGAAGATGTAGTGTGA	2133	0.4979	MLLISSVFSTIIFIPFALFLCFTSCVFTVAITEFDFGTLTLSSLKLLGDAHLDNESVRLTRDLAVPNSGSGRALYSKPVRFRQPGTHNPASFNTYFSFSITNLNPSSIGGGIAFLMAPDAETLGDAGGFLGLLKADGSSSGFLAVEFDTQMDVEFKDINGNHVGLDLNSMVSTHVGDLESVGIDLKSGDLVNAWIEYNGSTKGFNIWVSYSNIRPKDPLLSFDLDLDQYVNDLMYVGFSGSTQGSTEVHSISWWSFSSSFDSNSPSGLGSSVPPSPPTLSTMNSTASSVKSAPPSLAPAASNTQPENTKSTCHNEICKQNPGAVAGVVTAGAFVLALFAGAFIWVCSKKIKHVKKSESLASEIIKMPKEFSYKELKSATKCFNANRIIGHGAFGTVYKGILPENGDIIAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEQGEILLVYDLMPNGSLDKALFEARTPLPWPHRLKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDIFSYGAVVLEVACGRRPIEKDANGAGKVGVSSNLVEWVWNMHREGRLLMAADARLCGEFDEAEMRRVLLVGLACSQPDPFNRPTMRTVVQMLVGEADVPIVPRTKPATSYSTSHLLMNLQDSVSDGNGVIAVTSSSSDNSSNVEDVV	710

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g2749	710	FunFam	L-type lectin-domain containing receptor kinase VIII.1	458	673	-	-
	Prci1g2749	710	Pfam	Protein kinase domain	383	653	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g2749	710	SMART	serkin_6	382	655	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g2749	710	ProSiteProfiles	Protein kinase domain profile.	382	664	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g2749	710	CDD	STKc_IRAK	388	655	-	-
	Prci1g2749	710	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	501	513	IPR008271	GO:0004672\|GO:0006468
	Prci1g2749	710	SUPERFAMILY	Protein kinase-like (PK-like)	364	686	IPR011009	-
	Prci1g2749	710	PANTHER	-	59	665	-	-
	Prci1g2749	710	SUPERFAMILY	Concanavalin A-like lectins/glucanases	30	262	IPR013320	-
	Prci1g2749	710	ProSitePatterns	Protein kinases ATP-binding region signature.	388	411	IPR017441	GO:0005524
	Prci1g2749	710	MobiDBLite	consensus disorder prediction	266	312	-	-
	Prci1g2749	710	Pfam	Legume lectin domain	33	263	IPR001220	GO:0030246
	Prci1g2749	710	FunFam	L-type lectin-domain containing receptor kinase VIII.1	30	268	-	-
	Prci1g2749	710	Gene3D	-	30	268	-	-
	Prci1g2749	710	FunFam	L-type lectin-domain containing receptor kinase VIII.1	346	457	-	-
	Prci1g2749	710	CDD	lectin_legume_LecRK_Arcelin_ConA	48	249	IPR001220	GO:0030246
	Prci1g2749	710	Gene3D	Phosphorylase Kinase; domain 1	344	457	-	-
	Prci1g2749	710	Gene3D	Transferase(Phosphotransferase) domain 1	458	661	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g2749	Prci-Chr1	46550710	46553411	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g2749	12	692	Receptor kinase-like Gene Family	AT3G53380	70.130	0.0	936

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Prci1g2749		Pkinase	3.1e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g2749	-		-	qsa:O6P43_006685	1060.06