Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2747 ATGGCCGATGACTTTGATTTTGCTGATAAAGTCCCTCCTTCTTTCGATCGCGTGGGAGATGTGATTAAGAATTCTGAAGCCAAAGGATTCAATCCAGGGTTAGTAGTTCTCCTGGTTGTTGGTGGGCTGCTATTGACATTCCTCATTGGAAATTATGTCCTTTACATGTATGCACAGAGAACCCTTCCTCCTAGAAAAAAGAAGCCAGTCTCGAAGAAGAAGATGAAGAGGGAGAGACTGAAGCAAGGCGTTTCTGCACCTGGAGAGTAG 270 0.4481 MADDFDFADKVPPSFDRVGDVIKNSEAKGFNPGLVVLLVVGGLLLTFLIGNYVLYMYAQRTLPPRKKKPVSKKKMKRERLKQGVSAPGE 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2747 89 PANTHER DNA-BINDING PROTEIN S1FA2 1 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Prci1g2747 89 Pfam DNA binding protein S1FA 25 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Prci1g2747 89 MobiDBLite consensus disorder prediction 65 79 - -
Prci1g2747 89 MobiDBLite consensus disorder prediction 64 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2747 Prci-Chr1 46545415 46547692 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Prci1g2747 S1FA 3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2747 - - gmx:100499820 149.443