Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2735 ATGGGGAGGAAGGGAAATTGGTTTTCCAATGTGAAGAAAGCTTTCAGCCCCGAGTCAAAGAAGAAGGAAGATCAGAAAGCAAGCAAATCGAAGAAGAAATGGTTTGGGAAGCAAAAATTGGAGGCCACCTCAGACTCACACGTGGGTTCTGAGAAAACAGCACGTCCTTCTCTTCATCCTGAAGAAATTAAGTCACATGATGTTGAGAATGAAGCCAGTCAAAGTCATGTTCATGCAGTTGCAACTATTGTGAATGCTGAGAGACCTATTCCTGCGGCTCAGACAGCAGCTGTTGCAGTTCAAGCCCCTAAAATCCCTCGATTTGCCGGTAAATCAAGGGAAGAAGTGGCTACACTAAAGATTCAGACAGCTTTTAGGGGATATCTGGCAAGAAGAGCATTGCGAGCTTTGAGAGGGCTGGTCAGATTGAGGACACTAATGGAAGGGCCAATTGTAAAACGCCAAGCTACTAGCACTCTTCGTTCTATGCAAACTTTAGCTCGTGTGCAATCTCAGATTCGTTCTAGGAGGATCAGGATGTTCGAGGAGAATCAGGCTCTACAAAGGCAGCTCTTACACAAGCATGCAAAAGAGCTCGAGAGCATGCGGATTGGAGAGGAATGGGATGATAGCCTGCAATCCAAAGAACAAATTGAAGCAAAGTTGCTACAGAAGTATGAGGCAGCTATGAGAAGAGAAAAGGCGCTGGCTTACGCATTCACTCATCAGCAAACATGGAAGAATTCATACAGATCTATAAACCCAATGTTCATGGATCCAACTAATCCTTCCTGGGGTTGGAGCTGGCTGGAACGATGGATGGCTGCCCGGACATGGGAGAGCCAAAGCAAAATGGAGAAAGAAATGAACGATGACCATTCATCAGTGAGAAGTTCTAGCCGCAGCATCACCGGTGGAGAAATCAGCAAATCATATGCTCGTTACCAACTCAATTCTGAAAAGCATTCTCCCACAGCAAGCCAAATTCCTGACTCCCCTAGCTTCCGTTTATATTCAACTCCTTCAAAGCCAGCTTCCAGAAAACTGAAGAAGGCCAGCCCAAAGGACAGCTTTGCAATGGATGATGACATTAAAAGTGTGGCCAGTGCGCAGTCAGGGCGGTTCCGGAGGCACTCCATCGGTGGCGCGTCCGTGAGAGACGACGAGAGCCTTGCGAGCTCTCCGGCGGTTCCGAGTTACATGGTGGCAACTCAGTCTGCAAAAGCCAAGTCCAGGACGCAGAGTCCATTGGCAGCTGAGAATGGCACGCCGCAGAAGGCGAAAGATAAAGGATCTTTCGGGACTGCAAAGAAACGGCTTTCTTACCCGCCTTCACCGGCGAGGCCGTGGCGGCATTCAAGTGGGCCCCCAAAGGTAGAAAACAACTTAACTGCAGAAATCACTATGGTTGATGGCGGGGCTGCTTAA 1428 0.4839 MGRKGNWFSNVKKAFSPESKKKEDQKASKSKKKWFGKQKLEATSDSHVGSEKTARPSLHPEEIKSHDVENEASQSHVHAVATIVNAERPIPAAQTAAVAVQAPKIPRFAGKSREEVATLKIQTAFRGYLARRALRALRGLVRLRTLMEGPIVKRQATSTLRSMQTLARVQSQIRSRRIRMFEENQALQRQLLHKHAKELESMRIGEEWDDSLQSKEQIEAKLLQKYEAAMRREKALAYAFTHQQTWKNSYRSINPMFMDPTNPSWGWSWLERWMAARTWESQSKMEKEMNDDHSSVRSSSRSITGGEISKSYARYQLNSEKHSPTASQIPDSPSFRLYSTPSKPASRKLKKASPKDSFAMDDDIKSVASAQSGRFRRHSIGGASVRDDESLASSPAVPSYMVATQSAKAKSRTQSPLAAENGTPQKAKDKGSFGTAKKRLSYPPSPARPWRHSSGPPKVENNLTAEITMVDGGAA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2735 475 MobiDBLite consensus disorder prediction 15 72 - -
Prci1g2735 475 MobiDBLite consensus disorder prediction 402 463 - -
Prci1g2735 475 MobiDBLite consensus disorder prediction 284 304 - -
Prci1g2735 475 MobiDBLite consensus disorder prediction 318 341 - -
Prci1g2735 475 SMART iq_5 113 135 IPR000048 GO:0005515
Prci1g2735 475 MobiDBLite consensus disorder prediction 318 358 - -
Prci1g2735 475 PANTHER IQ-DOMAIN 5-RELATED 1 445 - -
Prci1g2735 475 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Prci1g2735 475 MobiDBLite consensus disorder prediction 402 421 - -
Prci1g2735 475 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
Prci1g2735 475 MobiDBLite consensus disorder prediction 1 72 - -
Prci1g2735 475 Pfam Protein of unknown function (DUF4005) 391 455 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2735 Prci-Chr1 46485905 46489318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2735 1 475 IQD Protein Family AT5G03040 49.287 1.02e-141 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2735 - - gmx:100800080 602.053