Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2722 ATGTGTACAGGAACCACGTGGTCGAATCATCTGCCCAGCCTTGAGATTGAGCACAGAGCCCCGAAGGTGGAGAGAGAATACGAAATAGAAAGCAAAAAGAAGAGAGAAGCGTCCGATCCTTCTCCCATTCCCATCGATCTCACTCTCGCGCCAAATACAAATTCTCCACATCCCCCCAGGTTTCCTGCAACCATGGCTGATGCTCCGGCCAGTCCCGGCGCTGGTGGTAGCCACGAGAGCGGTGATCAGAGCCCCCGCTCTAATGTCCGAGAGCAGGACAGATACCTGCCCATCGCCAATATCAGTCGAATCATGAAGAAGGCGCTTCCTGCTAATGGAAAAATCGCAAAGGATGCCAAGGAGACTGTGCAGGAATGCGTTTCCGAGTTCATCAGCTTTATCACCAGCGAGGCGAGTGACAAGTGTCAGAGGGAAAAGAGGAAGACCATTAACGGCGATGATTTACTGTGGGCAATGGCGACTCTGGGGTTCGAGGATTACATCGATCCCCTGAAGATTTATCTGAGCAGATACAGAGAGTTGTTGCAGATGGAGGGTGATACCAAGGGTTCGGCAAAGGGTGGAGAAGTATCTACCAAGAAAGATGTTCAACCAAGTCCTAATGCTCAGCTTGCTCATCAAGGTTCTTTCTCGCAAGGTGTCAGCTATACAAATTCTCAGTGA 684 0.5058 MCTGTTWSNHLPSLEIEHRAPKVEREYEIESKKKREASDPSPIPIDLTLAPNTNSPHPPRFPATMADAPASPGAGGSHESGDQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYRELLQMEGDTKGSAKGGEVSTKKDVQPSPNAQLAHQGSFSQGVSYTNSQ 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2722 227 PRINTS CCAAT-binding transcription factor subunit A signature 142 160 - -
Prci1g2722 227 PRINTS CCAAT-binding transcription factor subunit A signature 161 179 - -
Prci1g2722 227 PRINTS CCAAT-binding transcription factor subunit A signature 123 141 - -
Prci1g2722 227 MobiDBLite consensus disorder prediction 15 40 - -
Prci1g2722 227 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 79 201 IPR027113 GO:0001228|GO:0006355|GO:0016602
Prci1g2722 227 MobiDBLite consensus disorder prediction 187 227 - -
Prci1g2722 227 Gene3D Histone, subunit A 82 218 IPR009072 GO:0046982
Prci1g2722 227 SUPERFAMILY Histone-fold 92 212 IPR009072 GO:0046982
Prci1g2722 227 MobiDBLite consensus disorder prediction 1 93 - -
Prci1g2722 227 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 95 159 IPR003958 -
Prci1g2722 227 FunFam Nuclear transcription factor Y subunit B-3 84 211 - -
Prci1g2722 227 MobiDBLite consensus disorder prediction 201 227 - -
Prci1g2722 227 ProSitePatterns NF-YB/HAP3 subunit signature. 126 142 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2722 Prci-Chr1 46407220 46411043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2722 65 227 CCAAT-HAP3 Transcription Factor Family AT2G37060 76.331 2.61e-82 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Prci1g2722 CBFD_NFYB_HMF 2e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2722 K08065 - zju:107432901 288.5