Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2714 ATGTTGGATCTTAATCTCAACGTCGTTTCCTCTGACTCTGCGTCGAATTCCGTCGACGTGCCTCCTGAGAATGTTTTACTGCTTTCTGGTAGCCAAATGGATAGCTCCGGAAGCTTTAATTCTTCCATCGTCAATGCCGATACCTCCGCCAATACTTTTGACGAAGACTCTTGCTCTTATGATGATGCCTTTGCATACAACTTTGGAAAAGTGAAGAAGAATAACATAGATGATGGCACAAGCTACAAAGCAGTTGATCTTCCAGTAGGTGAAGGTGTTGATGGCTGTAATCGGACCATCCAGCTTTTTCCGATCTTCGGTGCCGAAGAGAGTCGTGTCACTGAATTGGGAATCGGTCAGCGATTTCCAGCTTCGGCTTCAAGTAAGGGATGGTTGGATTTCTTGTGCAAGGAGGTGGGTCCCCGTGGAACGCCGGAACAGAGGATGCTGCCGCCGCCGCAGCAGAGGCCGCAGGTCAAGAAGAGTCGGAGGGGACCGAGGTCGCGGAGCTCACAGTACCGCGGTGTTACATTTTATAGGAGGACTGGAAGATGGGAATCGCATATATGGGATTGTGGGAAACAAGTGTACCTGGGCGGATTTGATACAGCACATGCTGCAGCAAGGGCATATGATCGAGCCGCAATCAAGTTCCGTGGCCTTGATGCTGATATTAATTTCAATGTTAGTGATTATGAGGAGGATATAAAGCAGATGAGTAATTTCACAAAGGAAGAGTTTGTGCATATTCTGCGGCGACAGAGCACTGGCTTTTCAAGGGGAAGCTCTAAATATAGAGGAGTTACTCTACATAAATGTGGGCGATGGGAAGCTCGCATGGGGCAGTTTCTAGGGAAGAAGTATATATATCTCGGGCTATTTGATAGCGAAATAGAGGCTGCAAGGGCGTATGATAAAGCGGCCATAAAATGCAATGGGAGGGAAGCGATGACGAACTTTGAGCCAAGCTCATACGAAGGGGAGATAATATCTCAGGCAGATAATGAAGATGGCAACCCAAATCTTGATCTTAGCTTGGCCATTGCTCCCCCTGTTTACTCTGATGATTTTCAAGTCCCGCACGGCTGGCCCAATCTGCCCGTTGATGGGAGAGTTGCGTTTGAGAACTCTGCATCAAGGTTATTGAAGGGTCAACCGTCTCATGTTTTCCCGATAGCTACCCAGCATCCTTCTGTCAGGAATAGAACTGATTTCTTTCCCATTAATCAGGAAAGAGCAATGGAGAAAAGGATGGAAGCTAATCCTCTGCCAAACTGGGTATTTCAATACCAAGGTCCATATGGCGAGGCAAGTTTGATTCCATCCTTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACAAGGTTACCACCAACAGCAGCAGCTGATAGTCAGATTCATTTTCCAAACATGACGATCCATCCTTAG 1428 0.472 MLDLNLNVVSSDSASNSVDVPPENVLLLSGSQMDSSGSFNSSIVNADTSANTFDEDSCSYDDAFAYNFGKVKKNNIDDGTSYKAVDLPVGEGVDGCNRTIQLFPIFGAEESRVTELGIGQRFPASASSKGWLDFLCKEVGPRGTPEQRMLPPPQQRPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNVSDYEEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAMTNFEPSSYEGEIISQADNEDGNPNLDLSLAIAPPVYSDDFQVPHGWPNLPVDGRVAFENSASRLLKGQPSHVFPIATQHPSVRNRTDFFPINQERAMEKRMEANPLPNWVFQYQGPYGEASLIPSFSAAASSGFPSTRLPPTAAADSQIHFPNMTIHP 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2714 475 SUPERFAMILY DNA-binding domain 171 230 IPR016177 GO:0003677
Prci1g2714 475 ProSiteProfiles AP2/ERF domain profile. 264 321 IPR001471 GO:0003700|GO:0006355
Prci1g2714 475 MobiDBLite consensus disorder prediction 142 173 - -
Prci1g2714 475 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 142 342 - -
Prci1g2714 475 CDD AP2 172 230 IPR001471 GO:0003700|GO:0006355
Prci1g2714 475 CDD AP2 263 323 IPR001471 GO:0003700|GO:0006355
Prci1g2714 475 Gene3D AP2/ERF domain 171 230 IPR036955 GO:0003700|GO:0006355
Prci1g2714 475 Gene3D AP2/ERF domain 263 322 IPR036955 GO:0003700|GO:0006355
Prci1g2714 475 SMART rav1_2 172 234 IPR001471 GO:0003700|GO:0006355
Prci1g2714 475 SMART rav1_2 264 327 IPR001471 GO:0003700|GO:0006355
Prci1g2714 475 PRINTS Ethylene responsive element binding protein signature 265 276 IPR001471 GO:0003700|GO:0006355
Prci1g2714 475 PRINTS Ethylene responsive element binding protein signature 303 323 IPR001471 GO:0003700|GO:0006355
Prci1g2714 475 ProSiteProfiles AP2/ERF domain profile. 172 228 IPR001471 GO:0003700|GO:0006355
Prci1g2714 475 FunFam AP2-like ethylene-responsive transcription factor 171 230 - -
Prci1g2714 475 SUPERFAMILY DNA-binding domain 263 322 IPR016177 GO:0003677
Prci1g2714 475 FunFam AP2-like ethylene-responsive transcription factor 263 323 - -
Prci1g2714 475 Pfam AP2 domain 263 313 IPR001471 GO:0003700|GO:0006355
Prci1g2714 475 Pfam AP2 domain 172 220 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2714 Prci-Chr1 46361813 46365134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2714 159 347 AP2-EREBP Transcription Factor Family AT4G36920 80.513 2.66e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Prci1g2714 AP2 1.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2714 K09284 - qsa:O6P43_006713 603.594