Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2710 ATGCCGCCTAAGCAGCAATCGAAAGCTGATTTAGCAAAGAAGCAGAAGATCGTAGAGGATAAAACTTTTGGTCTAAAAAACAAGAACAAAAGCAAAAATGTCCAGAAATACGTTCAGAGCCTCAAGCAGTCCGTGCAGCCGAAGCCTGATCCTTCCAAAACCGCAGCCAAGAAAAAGAAGGAGGAGGACAAGGCCAAGGAGAAGGAGCTAAACGAGTTGTTCAAAATGGCTATTACCCAGCCTAAAGTGCCAGTTGGTGTTGATCCCAAGTCCATAGTATGTGAGTTTTTCAAAGCCGGACAGTGTACCAAGGGTTTTAAATGCAAGTTCTCTCATGATTTGAATGTTCAGAGGAAAGGGGAAAAGATTGACATTTACAGCGATAAGCGTGACCAGGAAACGATGGAGGATTGGGATCAAGAGACCTTGGAGAAAGTGGTGGAATCAAAGAAAACCGAGTATAACCAGAATAAACCAACTGACATAGTCTGTAAACATTTTTTGGAGGCAGTGGAGAAGAAGCAATATGGTTGGTTTTGGGTCTGCCCAAATGGTGGTAAGAATTGCCACTATAGACATGCCCTTCCCCCTGGATATGTTTTAAAATCTCAAATGAAGGCCCTGTTGGAGGAAGAGGCTGAAAAGATGCCAATTGAGGAGGAAATTGAAGATCAGCGCTCCAAATTACAAACTACTACTCCTATGACTCCTGAGTTATTCATGCAATGGAAGGAGAAGAAGATTGCAGAAAGAGATGCCAATTTGGCTGAACAACAGGCAGAGAGAGCTAAGAATGATCGCATGAGTGGTCGCGAGCTATTTTTGTCTAATGCTAGCTTGTTTGTGGATGATGTGGAGGCATATGACAAGTATCAAAGAGAGCCAGAATCTCGTGATAATGAACAGAAGCCACAGGCAAATGGCGATGCTGATGGTGGTCCTAGCACCTCAACAGCAACTGGTGCTGAGGCTGAAGGAGAAGCTAATGCTGAAGCAATTGATGAAGATGATGATGATGATGAGCTAGACATGGATGAATTGAATGAGTTGGAAGCAAGTTTATCAAAGACATCAATCCAAATAAAGGAGCCCGGAACTGAAGCTTAA 1107 0.4327 MPPKQQSKADLAKKQKIVEDKTFGLKNKNKSKNVQKYVQSLKQSVQPKPDPSKTAAKKKKEEDKAKEKELNELFKMAITQPKVPVGVDPKSIVCEFFKAGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDQETMEDWDQETLEKVVESKKTEYNQNKPTDIVCKHFLEAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLEEEAEKMPIEEEIEDQRSKLQTTTPMTPELFMQWKEKKIAERDANLAEQQAERAKNDRMSGRELFLSNASLFVDDVEAYDKYQREPESRDNEQKPQANGDADGGPSTSTATGAEAEGEANAEAIDEDDDDDELDMDELNELEASLSKTSIQIKEPGTEA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2710 368 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Prci1g2710 368 Coils Coil 246 266 - -
Prci1g2710 368 Gene3D - 87 204 - -
Prci1g2710 368 Gene3D - 205 279 - -
Prci1g2710 368 MobiDBLite consensus disorder prediction 291 368 - -
Prci1g2710 368 MobiDBLite consensus disorder prediction 39 65 - -
Prci1g2710 368 MobiDBLite consensus disorder prediction 309 323 - -
Prci1g2710 368 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Prci1g2710 368 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Prci1g2710 368 MobiDBLite consensus disorder prediction 351 368 - -
Prci1g2710 368 MobiDBLite consensus disorder prediction 328 348 - -
Prci1g2710 368 Pfam DRG Family Regulatory Proteins, Tma46 216 294 IPR032378 -
Prci1g2710 368 SUPERFAMILY CCCH zinc finger 89 113 IPR036855 GO:0046872
Prci1g2710 368 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Prci1g2710 368 MobiDBLite consensus disorder prediction 291 305 - -
Prci1g2710 368 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2710 Prci-Chr1 46338846 46343150 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci1g2710 DFRP_C 1.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2710 - - pcin:129300775 645.58