Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2702 ATGATGAGGGGTGCACTGATGAGTGTTAATGGTGAAGATAAAGAATTACAAGAATTGGCGCAGCGTCTACAAGTTGGGAAGAAAATCCTTATAGATGGAGCTACCGGTGAGGAACATGGATTACATGAGAAAGATGCGTTGAAGGTTAATGGAATAGTTGAAGTAGTTAAGGCTGGACAAGGGGTGACAGTGAAAGGCCCTGTTGTCCAGCCTATAGCAAAGCAACAGACTCGAGGGGCAATTGTTTGTTGGGAGAGGTTTTTACATCTTGGATCCCTCAAGGTCTTGCTTGTGGAGAATGATAACTCTACTCGCCATGTTGTTACCGCACTACTTTGCAATTGTTGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCATGGAAGATGTTGGAGGATATAACTAATCATATTGATCTCATTTTAACTGAGGTGGCAATGCCTTGCTTATCAGGAATTGGTCTTCTATCCAAAATTATGGGTCACCAAACACGGAAGAACATTCCAGTGATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGCTTGTCAAAGGGTGCTGTTGACTTTCTTGTAAAACCCTTACGGAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGCGATGCCATAGTTCTAGTGGAAGTGGGAGTGAAAGTAGCACACAAACCCAGAAGTCCATAAAATCAAAGAGTCTTGGGAAGTCGGGTAACTACACTGACAGCAATGATGAGGACAACAACAGAAGTGACGATCTGAATAGTAGGAATGGAACTGACAATGGTAGCGGAACTCAGACCTCCTGGACCAAACAAGCTGTTGAAGTTGACAGTTCCAAACAAGTGCCCCAGTGGGATCAAATAGTAGACTATCCTGATAGCACCTGTGCCCAATTCGTTCGCTCTAATGCTCAAACATGTGATGACAAGATTGTTCCTTTGGCCACAAAGTGTTGTCTCAAACATAAGCAACAAGTTGATCATTTGAAAGTCAAAGAGCTGAAAGTTGACTCAAGTAGAGAGCTTGACTTAACTTCTGACAACGGAAATGTGGTTCCCATCACTTCAGTACAAAATCAAGGTATCCATCTTGATGTAGGTTCCTCTAAATTCAATGGGCAGATTAGTAGAGGGCATCTGGATCTTAATTGTGAGAATCCATCTGGCAAGCTAAGTGCCAATGGTCCTTCGGTGTCTGATTTCATTACCAGTGAAGAATTTGAAGCCCAAAATAGAAGAACCAAGCTCTCAGATATTGAAAATAAAGCTACTAATGATGACGAGTTACCATCTCCTGAGCTCAGTTTAAAGAGACTTAGTGGAGTAAAAGAGGCTGGAATTAGAATTCAGGACAAACGGATTGTTGCAAGATGTTCAGACCTTTCATCCTTCTCAAGGTACAATGAAAGCTCTAACACTAAGTCTCCCGCTGAGTGTGTTCGAACTGGAAGCAACTCTCCACACGACAATAGCTTAGAAGTTACAAAGAAAGATTTATCACATGAAATTCAATCTCATTCTAATGGCAACCCTCCCCACCGGAGCTCAAATATTGATATGGGTTCCACTTCTAATAATGCTTTTCCTAAAATTAAAGTTTCAAGTGAACCAGTAGTAGCATCAACAGCCAGATGTTTGTACCAGGTATCTGCTGTCCAGCCTATAAGCAGCGACCTGTGTACCTTTCAACAAGTTGCGTTGCATAATAACAAGGATATGGCTACTGTCACAATGCTAGCACCAAAAGGAGGCACACGGAAGGATTCTCCAGCTGAGGACTTTCCTTACCAATTTGAAAACTTTGACAGTATAGCTGACAAGCATTACCTACCTGACCAAGTTGATTCAACATTAAAGGAAATAGCTGCAGCTGCACCACATTATGGGTCATCTAATGTAGTGGAATTGCTGGTTGAATGTAATTCTGGAGATAACAGTACCAAGAGAAGTGCAATGGGCGGCAACAATGGAAGCAACGGACTAAATGGGAGCAACACTGCAGTTGATGACAGAGGGACAAACATAAAGGGTGACAATGGAATTGCAGAAAATAATGGAACTGATGATGCTAGTGGGAGTGGCAATAAGAGTGCTAACAAGGTAGATCAAAGCAAGACTTCCAAAAGAGAAGCGTCCTTAAGTAAGTTTCACCGTAAGAGAAAGGAGAGTTCCATCCATAAAAAGGGAATATCATCCATGATAAATGCTTATGAGTAG 2232 0.4167 MMRGALMSVNGEDKELQELAQRLQVGKKILIDGATGEEHGLHEKDALKVNGIVEVVKAGQGVTVKGPVVQPIAKQQTRGAIVCWERFLHLGSLKVLLVENDNSTRHVVTALLCNCCYEVIEAANGLQAWKMLEDITNHIDLILTEVAMPCLSGIGLLSKIMGHQTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRRCHSSSGSGSESSTQTQKSIKSKSLGKSGNYTDSNDEDNNRSDDLNSRNGTDNGSGTQTSWTKQAVEVDSSKQVPQWDQIVDYPDSTCAQFVRSNAQTCDDKIVPLATKCCLKHKQQVDHLKVKELKVDSSRELDLTSDNGNVVPITSVQNQGIHLDVGSSKFNGQISRGHLDLNCENPSGKLSANGPSVSDFITSEEFEAQNRRTKLSDIENKATNDDELPSPELSLKRLSGVKEAGIRIQDKRIVARCSDLSSFSRYNESSNTKSPAECVRTGSNSPHDNSLEVTKKDLSHEIQSHSNGNPPHRSSNIDMGSTSNNAFPKIKVSSEPVVASTARCLYQVSAVQPISSDLCTFQQVALHNNKDMATVTMLAPKGGTRKDSPAEDFPYQFENFDSIADKHYLPDQVDSTLKEIAAAAPHYGSSNVVELLVECNSGDNSTKRSAMGGNNGSNGLNGSNTAVDDRGTNIKGDNGIAENNGTDDASGSGNKSANKVDQSKTSKREASLSKFHRKRKESSIHKKGISSMINAYE 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2702 743 MobiDBLite consensus disorder prediction 259 283 - -
Prci1g2702 743 Pfam Response regulator receiver domain 95 206 IPR001789 GO:0000160
Prci1g2702 743 SMART REC_2 93 208 IPR001789 GO:0000160
Prci1g2702 743 MobiDBLite consensus disorder prediction 651 706 - -
Prci1g2702 743 MobiDBLite consensus disorder prediction 651 743 - -
Prci1g2702 743 FunFam Two-component response regulator-like PRR37 93 253 - -
Prci1g2702 743 ProSiteProfiles Response regulatory domain profile. 94 212 IPR001789 GO:0000160
Prci1g2702 743 SUPERFAMILY CheY-like 92 217 IPR011006 -
Prci1g2702 743 Gene3D - 92 255 - -
Prci1g2702 743 PANTHER TWO-COMPONENT RESPONSE REGULATOR 94 382 IPR045279 GO:0009736
Prci1g2702 743 MobiDBLite consensus disorder prediction 470 495 - -
Prci1g2702 743 MobiDBLite consensus disorder prediction 217 283 - -
Prci1g2702 743 MobiDBLite consensus disorder prediction 217 246 - -
Prci1g2702 743 MobiDBLite consensus disorder prediction 509 528 - -
Prci1g2702 743 MobiDBLite consensus disorder prediction 470 528 - -
Prci1g2702 743 CDD psREC_PRR 95 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2702 Prci-Chr1 46276719 46285148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2702 40 288 Response Regulator Gene Family AT5G60100 57.422 8.24e-78 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci1g2702 Response_reg 5.7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2702 K12129 - gmx:100796933 778.089