Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2699 ATGATGAGGGGTGCACTGATGAGTGTTAATGGTGAAGATAAAGAATTACAAGAATTGGCGCAGCGTCTACAAGTTGGGAAGAAAATCCTTATAGATGGAGCTACCGGTGAGGAACATGGATTACATGAGAAAGATGCGTTGAAGGTTAATGGAATAGTTGAAGTAGTTAAGGCTGGACAAGGGGTGACAGTGAAAGGCCCTGTTGTCCAGCCTATAGCAAAGCAACAGACTCGAGGGGCAATTGTTTGTTGGGAGAGGTTTTTACATCTTGGATCCCTCAAGGTCTTGCTTGTGGAGAATGATAACTCTACTCGCCATGTTGTTACCGCACTACTTTGCAATTGTTGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCATGGAAGATGTTGGAGGATATAACTAATCATATTGATCTCATTTTAACTGAGGTGGCAATGCCTTGCTTATCAGGAATTGGTCTTCTATCCAAAATTATGGGTCACCAAACACGGAAGAACATTCCAGTGATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGCTTGTCAAAGGGTGCTGTTGACTTTCTTGTAAAACCCTTACGGAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGCGATGCCATAGTTCTAGTGGAAGTGGGAGTGAAAGTAGCACACAAACCCAGAAGTCCATAAAATCAAAGAGTCTTGGGAAGTCGGGTAACTACACTGACAGCAATGATGAGGACAACAACAGAAGTGACGATCTGAATAGTAGGAATGGAACTGACAATGGTAGCGGAACTCAGACCTCCTGGACCAAACAAGCTGTTGAAGTTGACAGTTCCAAACAAGTGCCCCAGTGGGATCAAATAGTAGACTATCCTGATAGCACCTGTGCCCAATTCGTTCGCTCTAATGCTCAAACATGTGATGACAAGATTGTTCCTTTGGCCACAAAGTGTTGTCTCAAACATAAGCAACAAGTTGATCATTTGAAAGTCAAAGAGCTGAAAGTTGACTCAAGTAGAGAGCTTGACTTAACTTCTGACAACGGAAATGTGGTTCCCATCACTTCAGTACAAAATCAAGGTATCCATCTTGATGTAGGTTCCTCTAAATTCAATGGGCAGATTAGTAGAGGGCATCTGGATCTTAATTGTGAGAATCCATCTGGCAAGCTAAGTGCCAATGGTCCTTCGGTGTCTGATTTCATTACCAGTGAAGAATTTGAAGCCCAAAATAGAAGAACCAAGCTCTCAGATATTGAAAATAAAGCTACTAATGATGACGAGTTACCATCTCCTGAGCTCAGTTTAAAGAGACTTAGTGGAGTAAAAGAGGCTGGAATTAGAATTCAGGACAAACGGATTGTTGCAAGATGTTCAGACCTTTCATCCTTCTCAAGGTACAATGAAAGCTCTAACACTAAGTCTCCCGCTGAGTGTGTTCGAACTGGAAGCAACTCTCCACACGACAATAGCTTAGAAGTTACAAAGAAAGATTTATCACATGAAATTCAATCTCATTCTAATGGCAACCCTCCCCACCGGAGCTCAAATATTGATATGGGTTCCACTTCTAATAATGCTTTTCCTAAAATTAAAGTTTCAAGTGAACCAGTAGTAGCATCAACAGCCAGATGTTTGTACCAGGTATCTGCTGTCCAGCCTATAAGCAGCGACCTGTGTACCTTTCAACAAGTTGCGTTGCATAATAACAAGGATATGGCTACTGTCACAATGCTAGCACCAAAAGGAGGCACACGGAAGGATTCTCCAGCTGAGGACTTTCCTTACCAATTTGAAAACTTTGACAGTATAGCTGACAAGCATTACCTACCTGACCAAGTTGATTCAACATTAAAGGAAATAGCTGCAGCTGCACCACATTATGGGTCATCTAATGTAGTGGAATTGCTGGTTGAATGTAATTCTGGAGATAACAGTACCAAGAGAAGTGCAATGGGCGGCAACAATGGAAGCAACGGACTAAATGGGAGCAACACTGCAGTTGATGACAGAGGGACAAACATAAAGGGTGACAATGGAATTGCAGAAAATAATGGAACTGATGATGCTAGTGGGAGTGGCAATAAGAGTGCTAACAAGGTAGATCAAAGCAAGACTTCCAAAAGAGAAGCGTCCTTAAGTAAGTTTCACCGTAAGAGAAAGGAGAGTTCCATCCATAAAAAGGTCCAACATCGAAGTAGAAAGAAACCAGCTGAACAACAGCCTCGCTTTTGTGGACAATTTGTTCACAAGTCCACATACGAAAATGCACCAGAGGCAGAAGACGATTGA 2307 0.4192 MMRGALMSVNGEDKELQELAQRLQVGKKILIDGATGEEHGLHEKDALKVNGIVEVVKAGQGVTVKGPVVQPIAKQQTRGAIVCWERFLHLGSLKVLLVENDNSTRHVVTALLCNCCYEVIEAANGLQAWKMLEDITNHIDLILTEVAMPCLSGIGLLSKIMGHQTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRRCHSSSGSGSESSTQTQKSIKSKSLGKSGNYTDSNDEDNNRSDDLNSRNGTDNGSGTQTSWTKQAVEVDSSKQVPQWDQIVDYPDSTCAQFVRSNAQTCDDKIVPLATKCCLKHKQQVDHLKVKELKVDSSRELDLTSDNGNVVPITSVQNQGIHLDVGSSKFNGQISRGHLDLNCENPSGKLSANGPSVSDFITSEEFEAQNRRTKLSDIENKATNDDELPSPELSLKRLSGVKEAGIRIQDKRIVARCSDLSSFSRYNESSNTKSPAECVRTGSNSPHDNSLEVTKKDLSHEIQSHSNGNPPHRSSNIDMGSTSNNAFPKIKVSSEPVVASTARCLYQVSAVQPISSDLCTFQQVALHNNKDMATVTMLAPKGGTRKDSPAEDFPYQFENFDSIADKHYLPDQVDSTLKEIAAAAPHYGSSNVVELLVECNSGDNSTKRSAMGGNNGSNGLNGSNTAVDDRGTNIKGDNGIAENNGTDDASGSGNKSANKVDQSKTSKREASLSKFHRKRKESSIHKKVQHRSRKKPAEQQPRFCGQFVHKSTYENAPEAEDD 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2699 768 MobiDBLite consensus disorder prediction 259 283 - -
Prci1g2699 768 SMART REC_2 93 208 IPR001789 GO:0000160
Prci1g2699 768 MobiDBLite consensus disorder prediction 651 706 - -
Prci1g2699 768 ProSiteProfiles CCT domain profile. 714 756 IPR010402 GO:0005515
Prci1g2699 768 Pfam Response regulator receiver domain 95 206 IPR001789 GO:0000160
Prci1g2699 768 ProSiteProfiles Response regulatory domain profile. 94 212 IPR001789 GO:0000160
Prci1g2699 768 MobiDBLite consensus disorder prediction 651 768 - -
Prci1g2699 768 MobiDBLite consensus disorder prediction 470 495 - -
Prci1g2699 768 PANTHER TWO-COMPONENT RESPONSE REGULATOR 94 408 IPR045279 GO:0009736
Prci1g2699 768 FunFam Two-component response regulator-like PRR37 93 253 - -
Prci1g2699 768 MobiDBLite consensus disorder prediction 217 283 - -
Prci1g2699 768 MobiDBLite consensus disorder prediction 217 246 - -
Prci1g2699 768 Pfam CCT motif 714 756 IPR010402 GO:0005515
Prci1g2699 768 SUPERFAMILY CheY-like 92 217 IPR011006 -
Prci1g2699 768 Gene3D - 92 255 - -
Prci1g2699 768 MobiDBLite consensus disorder prediction 509 528 - -
Prci1g2699 768 MobiDBLite consensus disorder prediction 470 528 - -
Prci1g2699 768 MobiDBLite consensus disorder prediction 717 739 - -
Prci1g2699 768 CDD psREC_PRR 95 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2699 Prci-Chr1 46276307 46285147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2699 40 288 Response Regulator Gene Family AT5G60100 57.422 1.96e-77 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Prci1g2699 Response_reg 6e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2699 K12129 - gmx:100796933 817.764