Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2696 ATGGGTTGGATTCCCTGTTCCGGAAATTCAAACACTAAGAAGAAGACCAAGAAGCAGACGAAGAAGATGCAGGTACAGGAGAACATGGTTGATCCGGTAAAAGCGGCCACAGGGAAGTTGAAGAGGAATTCTTCTACAAATTCCAAGGATGCCTCTAAAACTGGGAACCCTGACCATATTGCAGCACAGACTTTCACATTTCGTGAGTTGGCTACTGCAACTAGAAATTTTAGAGCAGAATGCTTGTTGGGTGAGGGAGGTTTTGGAAGAGTATACAAAGGGCGCTTGGAAAATACTAATCAGGTTGTTGCAATTAAGCAACTTGACCGAAATGGGCTGCAAGGGAATAGAGAATTCCTAGTTGAAGTGTTGATGTTAAGTCTACTACACCATCCTAACCTTGTCAGCCTCATTGGTTACTGTGCTGATGGAGATCAAAGGCTTTTAGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTACATGATGTTTCTCCTGGCAAGAAATGTCTCGACTGGAATACAAGAATGAAAATAGCAGCAGGGGCAGCGAAAGGGTTGGAATATCTTCATGACAAAGCTAACCCTCCTGTCATTTACCGAGATTTAAAATGCTCAAACATTTTGCTTGGTGAAGGTTATCACCCAAAGTTATCTGATTTTGGCTTGGCCAAACTTGGGCCAGTAGGTGAAAACACTCATGTCTCAACGAGGGTTATGGGCACTTATGGATATTGTGCTCCGGAGTATGCAATGACAGGACAACTGACTCTGAAATCAGATGTCTATAGCTTTGGTGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCTATTGACAATTCAAAGGCTGCTGGAGAACAGAATCTTGTTGCATGGGCGAGACCTTTGTTTACAGAACGACAAAAATTTTCACAAATGGCGGATCCAATGCTCCAAGGTCAGTATCCTTCTAGAGGGTTGTACCAGGCCCTTGCAGTTGCTGCAATGTGTGTTCAGGAGCAGGCTAGTATGCGTCCAGTTATAGCTGATGTAGTCACAGCTTTGACTTACCTTGCTTCACAAAGATATGACTTAAATGCAGAGTCACTGCAAAGCTCTCGCCTTTCCCCTGCCACTCCTTCTAGAACCAAGAGGGGGCAGTGA 1152 0.4366 MGWIPCSGNSNTKKKTKKQTKKMQVQENMVDPVKAATGKLKRNSSTNSKDASKTGNPDHIAAQTFTFRELATATRNFRAECLLGEGGFGRVYKGRLENTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEYMPLGSLEDHLHDVSPGKKCLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKAAGEQNLVAWARPLFTERQKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQASMRPVIADVVTALTYLASQRYDLNAESLQSSRLSPATPSRTKRGQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2696 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Prci1g2696 383 Pfam Protein tyrosine and serine/threonine kinase 81 349 IPR001245 GO:0004672|GO:0006468
Prci1g2696 383 Gene3D Transferase(Phosphotransferase) domain 1 154 371 - -
Prci1g2696 383 MobiDBLite consensus disorder prediction 1 58 - -
Prci1g2696 383 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2696 383 PIRSF TyrPK_CSF1-R 165 280 - -
Prci1g2696 383 PIRSF TyrPK_CSF1-R 2 66 - -
Prci1g2696 383 PIRSF TyrPK_CSF1-R 304 381 - -
Prci1g2696 383 PIRSF TyrPK_CSF1-R 75 168 - -
Prci1g2696 383 Gene3D Phosphorylase Kinase; domain 1 45 153 - -
Prci1g2696 383 PANTHER OS07G0668900 PROTEIN 15 363 - -
Prci1g2696 383 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2696 383 SUPERFAMILY Protein kinase-like (PK-like) 60 351 IPR011009 -
Prci1g2696 383 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Prci1g2696 383 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Prci1g2696 383 CDD STKc_IRAK 83 352 - -
Prci1g2696 383 MobiDBLite consensus disorder prediction 39 58 - -
Prci1g2696 383 FunFam Serine/threonine-protein kinase PBS1 48 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2696 Prci-Chr1 46245266 46249100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2696 40 356 Glycoside Hydrolase AT3G07070 68.770 1.30e-165 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci1g2696 PK_Tyr_Ser-Thr 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2696 - - gmx:100499648 687.182