Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2685 ATGGAAGAAACCGCAACCATATTGGCTGCACTCTCCGCCCTCCCTCCTCCTCACCTCTCCGATCTCATCCACTCCATCGCCTCCGTCGTCCACCACCACCACCTCCGCCTCGCCTCCGTCCTCTCTTCCCAATCCCTCTTCTCCCTCGCCCTCCATTACCTCCACTCTCTCTCCCTTCCCCAAAAGTCCCTCCTTATTGCCCGCCACCTCCTCTCTTTTCTCCACATCCTCACGCGCCACCTCCAACCGCCGCCTCCTCCATTATCTGCCCTCACGAGACAGCGTGACCTCGACGCCGTTCTGCTGCTCCTCTTATTCTGCGATGCCCACCAGCACCACCCGCAAGCTCTCGAAACGCCAGTCTGCAATTGGCGCAGAAATCTGAGCAGGCTTTTCTCCGATAAATTGTTGGGGATGTCTTCTACTTTTATCGGGGAATGCAGTGCCGCTATTCTGATTCCCTGTATTGAGATGGTAATCCGGTGCCGGAGGCTGGTGGGTTCGATGGACTGCGGCGGAGGAAAGGGTGGCGGGGAAGTGGCGGCGTCGAGGGCGGCCGTGGTGGCGCTGCCGCGAGTGGAGGTGAGAGCGGGTGGAAGGGAGTGCGTGATATGCAAAGAGGAGATGAGAGTGGGGAGGGATGTGTGCGAACTGCCATGTCAGCACGTGTTTCATTGGAACTGCATATTACCGTGGTTGAGTAAAAAGAATACGTGTCCCTGCTGCAGGTTCCGGCTACCGTCCGATGATGTGCTTAGAGAGATCCAACGGCTGTGGGAGGTCTTGGTCAAAACGTGTGGGGCAGAGTTGGGGGATTGA 819 0.5788 MEETATILAALSALPPPHLSDLIHSIASVVHHHHLRLASVLSSQSLFSLALHYLHSLSLPQKSLLIARHLLSFLHILTRHLQPPPPPLSALTRQRDLDAVLLLLLFCDAHQHHPQALETPVCNWRRNLSRLFSDKLLGMSSTFIGECSAAILIPCIEMVIRCRRLVGSMDCGGGKGGGEVAASRAAVVALPRVEVRAGGRECVICKEEMRVGRDVCELPCQHVFHWNCILPWLSKKNTCPCCRFRLPSDDVLREIQRLWEVLVKTCGAELGD 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2685 272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 146 247 - -
Prci1g2685 272 SMART ring_2 202 242 IPR001841 -
Prci1g2685 272 ProSiteProfiles Zinc finger RING-type profile. 202 243 IPR001841 -
Prci1g2685 272 SUPERFAMILY RING/U-box 198 249 - -
Prci1g2685 272 CDD RING-H2_PA-TM-RING 201 243 - -
Prci1g2685 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 249 IPR013083 -
Prci1g2685 272 Pfam Ring finger domain 201 243 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2685 Prci-Chr1 46194907 46196324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2685 2 265 C3H Transcription Factor Family AT5G02750 50.000 2.36e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2685 K11982 - qsa:O6P43_006733 315.849