Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2679 ATGTCTAGCTTACCTCCGCCGCAAACTTTGTCGTCAGCGGTGCCCACTAGCTCCCCCACCGATGACAGAAGTGCCTTCTTCAATCAATCCATGGAGCTTGTCCAAGTTCCGTCTCAAAGGTCAACCAGAGCCCATGTCTCTCGTAGCCCCTCCCTCGCCGACCTCCTTAAACGTGTAGTCGGAGATGCTCAAAATGATGTCGCCTCTCAGCCCCACCACATCCTCGACCTCGTTCCCCCTCCTCCTTCTCCCTCTTGCTCTTTTGTCCTTTCCTTCACCAACTTGACTTACAGCATCAAAGTCAATCGTAAAATAAGCCTCTCCTCTTGTTTCTCTCGAAAACATGTGGATTTGAATTCCCCGCTTCATAGTGTGACCGAATCTGAATCGTCAAAGGCTAACGCTGTAAAGGTTTTGCTCAATAATATTTCCGGCGAGGCCCGGGATGGAGAAATCATGGCCGTTCTAGGTGCCAGTGGGTCTGGAAAATCAACACTGATCGATGCCCTCGCCAATAGAATCTCCAAAGAGAGCTTGAAAGGAACAATCATGTTAAATGGTGAAGCTTTGGATTCCAGTCTTCTCAAAGTGATTTCAGCTTATGTCATGCAGGACGACCTTCTCTTTCCCATGCTAACTGTGGAAGAGACTCTCATGTTTTCCGCCGAGTTTCGGCTTCCTCGCTCCCTCTCTAAGTCTAAGAAAAAGGCTAGAGTCCAAGCTCTCATCGACCAATTGGGCCTCCGTAATGCCTCCAATACAGTCATCGGCGACGAAGGCCATCGTGGGGTCTCCGGAGGTGAGCGACGTCGTGTCTCTATCGGAATTGATATCATTCACGACCCGATTGTCTTGTTCCTTGATGAACCCACTTCAGGACTTGACTCCACCAGTGCATACATGGTCGTCAAGGTGTTACAGCGAATAGCCCAAAGCGGAAGCGTCGTCATCCTGTCCATACATCAACCAAGTTACAGAATCATCGGATTATTAGACCGGTTGATTTTCCTCTCACAAGGCCAAACCGTCTATAGCGGCTCACCGGCGAATCTACCACCCTTTTTCTCGGAGTTTGGACACCCGATCCCCGACAATGAGAACCGCACCGAGTTCACCCTCGACCTTATTCGTGAGCTCGAACAAAACCCTGGTGGGACGAAGGGCCTAGTAGAATTCAACAAGTCTTGGCAATTGAATCACTTGAAAAGCAAGCCCAACGACGATGATAATCCCCTTAACGGACAAAAGGTTTCACTCAAAGATGCCATCGGTACAAGCATTTCTCGAGGCAAGTTGGTCTCCGGGGTGCCAAATAATTCGAATCTCACAATATCTTCGTCTGTTCCAACCTTTGCAAACCCGTTTTGGATCGAGATGGTTGTAATAGCAAAACGATCGCTGATCAATTCTCGAAGGATGCCTGAATTATTTGGCATACGAATTGGTGCAGTTCTGGTAACCGGAATCATCTTGGCCACTATTTTCTGGCATCTTGATAGTTCTCCGAAAGGTGCTCAAGAGCGATTAGGGTTCTTCGCCTTCGCCATATCCACCACCTTCTACACTTGCGCGGAAGCCATGCCTGTCTTCCTCCAAGAGCGATATATCTTCATGAGAGAAACCGCATACAATGCCTACCGTCGATCCTCCTACGTTCTGGCCAATTCAATCATCTCAGTACCATCCTTAATATTCCTTTCCTTAGCATTTGCTGTGACGACGTTCTGGGCGGTGGGTTTAGCCGGCGGCGCATCCGGGTTCTTGTTCTACTTGTTGATAATCTTAGCATCTTTCTGGACAGGAAACTCCTTCGTGACGTTTCTTTCAGGAGTGGTTTCCCAAGTGATGTTGGGCTTCACCGTGGTGGTTGCTATTATAGCTTACTTCGTACTGTTCAGTGGGTTCTTCATAAGCAGAGACAGGATTCCTGCGTATTGGATATGGTTTCACTATATTTCACTGGTGAAGTACCCATACGAGGCTGTTTTGCAAAACGAGTTCGGTATTCAGCCTCCAAGGTGCTTTGTGAGAGGGACTCAGATGTTTGACACGACGCCGTTAGGGGAGCTACCGGAAACACTGAAGTTGGAATTGCTTAAGAGTATGGGCAAGACGCTGGGTATGAACATCACAAGTTCTACATGCGTGACCACAGGAATGGATATATTAAAGCAACAGGGGATTACGGACCTAAGCAAGTGGAATTGCCTGTGGATAACCATCGCATGGGGACTCTTCTTTAGATTTTTGTTTTATTTGGCTTTGATGTTTGGGAGCAAGAATAAGAGGACCTAA 2295 0.4793 MSSLPPPQTLSSAVPTSSPTDDRSAFFNQSMELVQVPSQRSTRAHVSRSPSLADLLKRVVGDAQNDVASQPHHILDLVPPPPSPSCSFVLSFTNLTYSIKVNRKISLSSCFSRKHVDLNSPLHSVTESESSKANAVKVLLNNISGEARDGEIMAVLGASGSGKSTLIDALANRISKESLKGTIMLNGEALDSSLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSKKKARVQALIDQLGLRNASNTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSVVILSIHQPSYRIIGLLDRLIFLSQGQTVYSGSPANLPPFFSEFGHPIPDNENRTEFTLDLIRELEQNPGGTKGLVEFNKSWQLNHLKSKPNDDDNPLNGQKVSLKDAIGTSISRGKLVSGVPNNSNLTISSSVPTFANPFWIEMVVIAKRSLINSRRMPELFGIRIGAVLVTGIILATIFWHLDSSPKGAQERLGFFAFAISTTFYTCAEAMPVFLQERYIFMRETAYNAYRRSSYVLANSIISVPSLIFLSLAFAVTTFWAVGLAGGASGFLFYLLIILASFWTGNSFVTFLSGVVSQVMLGFTVVVAIIAYFVLFSGFFISRDRIPAYWIWFHYISLVKYPYEAVLQNEFGIQPPRCFVRGTQMFDTTPLGELPETLKLELLKSMGKTLGMNITSSTCVTTGMDILKQQGITDLSKWNCLWITIAWGLFFRFLFYLALMFGSKNKRT 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2679 764 Pfam ABC-2 type transporter 460 667 IPR013525 GO:0016020|GO:0140359
Prci1g2679 764 Pfam ABC transporter 140 292 IPR003439 GO:0005524
Prci1g2679 764 MobiDBLite consensus disorder prediction 1 22 - -
Prci1g2679 764 ProSitePatterns ABC transporters family signature. 264 278 IPR017871 GO:0005524|GO:0016887
Prci1g2679 764 FunFam ABC transporter G family member 6 128 355 - -
Prci1g2679 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 355 IPR027417 -
Prci1g2679 764 Pfam ABC-2 type transporter 321 411 IPR043926 GO:0140359
Prci1g2679 764 Gene3D - 127 353 IPR027417 -
Prci1g2679 764 SMART AAA_5 149 341 IPR003593 GO:0016887
Prci1g2679 764 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 125 364 IPR003439 GO:0005524
Prci1g2679 764 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2679 Prci-Chr1 46164011 46166560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2679 139 351 Calmodulin-binding Proteins AT2G36910 27.315 2.60e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2679 K05681 - qsa:O6P43_006742 1077.39