Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2661 ATGCCTAAAATTCTACATATACCCATCCACACGCTCCATAGTTTCTCACCTCATAACATTCTTCCTTTTCCCATTCTTCTCCATCACTTCGCTACTCCTCACGTTCGCATTTCTTCCATGAAAAGACAGATACAAAACGGAAACATAGAGAGCCTAGATCTGGCAATCTCTCTAATGCTTCTCTCTCAAGCACCACCACAGCACAAGTTCCTCAACAATATCCCATCAGTACGTCAAGAATTTGCATGCAAGACCTGCAACCGCAAGTTCTCGTCGTTTCAGGCGCTGGGAGGTCACAGAGCCAGCCACAAGAAGCCCAAACTTGATTCCCAAGCAGACCTACGAAAACCCAATTGGGAGCACCAGTGCTCTATTTGTGGCCAGCGATTCTCTCTGGGACAAGCCCTTGGAGGCCACATGAGAAAGCACAGAGCAGCCCTGAACGAAGACTCTGCTTCTATAACTGAGGTGGTTTCTGAAGTTCCTGTTCTCAAGAGATCTAACAGTAAGAGGGTTATGTGCTTGGACTTGAACTTAACCCCTCTCGAGAACGACTTGAAGTTGCTTTTCGGAAACAAGGCTCCTTCCGTTGATCTTACCTTGTGCTGA 609 0.4696 MPKILHIPIHTLHSFSPHNILPFPILLHHFATPHVRISSMKRQIQNGNIESLDLAISLMLLSQAPPQHKFLNNIPSVRQEFACKTCNRKFSSFQALGGHRASHKKPKLDSQADLRKPNWEHQCSICGQRFSLGQALGGHMRKHRAALNEDSASITEVVSEVPVLKRSNSKRVMCLDLNLTPLENDLKLLFGNKAPSVDLTLC 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2661 202 SUPERFAMILY beta-beta-alpha zinc fingers 81 143 IPR036236 -
Prci1g2661 202 SMART c2h2final6 121 143 IPR013087 -
Prci1g2661 202 SMART c2h2final6 81 103 IPR013087 -
Prci1g2661 202 ProSitePatterns Zinc finger C2H2 type domain signature. 123 143 IPR013087 -
Prci1g2661 202 ProSiteProfiles Zinc finger C2H2 type domain profile. 121 143 IPR013087 -
Prci1g2661 202 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Prci1g2661 202 Gene3D Classic Zinc Finger 79 143 - -
Prci1g2661 202 PANTHER ZINC FINGER PROTEIN ZAT5 52 185 - -
Prci1g2661 202 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Prci1g2661 202 Pfam C2H2-type zinc finger 121 145 - -
Prci1g2661 202 Pfam C2H2-type zinc finger 81 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2661 Prci-Chr1 46036212 46037270 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2661 40 201 C2H2 Transcription Factor Family AT2G37430 46.591 3.51e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci1g2661 zf-C2H2_6 1.5e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2661 - - aprc:113870747 204.527