Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2637 ATGGCGGCAGCGAGGCGGCTCCGGGACCTGCAAGCCCAACCGGGGAATAGGATCTGCGTCGATTGCTCTCAAAAGAACCCCCAATGGGCTTCTGTTTCCTATGGAGTCTTCATGTGCTTAGAGTGCTCCGGCAAGCACCGTGGCCTCGGTGTCCACATCTCCTTCGTCCGATCCGTTACAATGGATTCCTGGTCCGAAATCCAGATCAAGAAGATGGAAGCAGGTGGTAACGAGCAACTTAACGCCTTCCTCGCCCAGTATGGTATCGCCAAGGAGACCGATATTGTTGCCAAGTACAATACTAATGCGGCCAGCATTTATAGGGATCGGATTCAGGCCCTTGCCGAGGGACGACCGTGGCGGGATCCACCTGTGGTCAAGGAGAACCTCGGCCCTGGGAAGAGTAAGCCTCCGTTGCCGAAAAGTGGAAATGATGGAGGCTGGGATAGTTGGGATAATGATGAGGGGGTCAGATCACCCCATGACTTCAAGCGCAACATGTCTACGGGGGATGTAAGGGGGTTCAATGGAGGTTCTGCCGGTAGCAGGCCCGCGAGATCGAGATCGACGGAGGATATCTACACGCGGTCGCAATTGGAGGCCTCCGCCGCCAACAAAGACAGCTTTTTCGCTCGCAAGATTGCAGAGAACGATTCACGACCCGAAGGGATTCCACCCTCGCAAGGAGGCAAGTTCGTTGGATTCGGATCTAGTCCCGCACCTTCTCGGGTGAATAACCAACAAAACGATGTCTTTTCAGTTATGTCTCAGGGATTTGGGAAATTGTCCTTGGCTGCTGCCTCAGCGGCTCACTCTGCGGCTAATGTTGTTCAGGCTGGCACTAAAGAGATCGCTACCAAGGTAAAGGATGGTGGCTATGATTACAGAGTCAATGAAACCGTCAATGTTGTCACTCAGAAGACGTCAGAGATAGGACAAAGGACTTGGGGGATTATGAAGGGGGTCATGGCTTTGGCTTCGCAGAAAGTTGAGGAGTACACTAAAGATAACCCAAACTGGCCAATTGATAATAACTGGCAGCGAAATGAAAACGATAGAAATGGCTACTATCAGGAATATAATCATGAGACCAAAGGTTGGAATTCTTCTACAGGAGGAGGGCAACCTTCATCAGTTGGGCAGAATAATACTTACGCCTCAAGCTCATGGGATGATTGGGACAATAATGATACCAGGAAGAAAGAACCGACTAGAGGATCAGCTACTCATAACAATGATGGTTGGGCTGGCTGGGATGATCCTAAAGATGATGAATATGAAAATTCCTACCAGAGTGTATCAAATAAGAATGCAGTTGGTCATAATGGGAAGCCAGGTGACAGGTGGACAGGAGGAGGCTTTCTGTAA 1368 0.5029 MAAARRLRDLQAQPGNRICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNEQLNAFLAQYGIAKETDIVAKYNTNAASIYRDRIQALAEGRPWRDPPVVKENLGPGKSKPPLPKSGNDGGWDSWDNDEGVRSPHDFKRNMSTGDVRGFNGGSAGSRPARSRSTEDIYTRSQLEASAANKDSFFARKIAENDSRPEGIPPSQGGKFVGFGSSPAPSRVNNQQNDVFSVMSQGFGKLSLAAASAAHSAANVVQAGTKEIATKVKDGGYDYRVNETVNVVTQKTSEIGQRTWGIMKGVMALASQKVEEYTKDNPNWPIDNNWQRNENDRNGYYQEYNHETKGWNSSTGGGQPSSVGQNNTYASSSWDDWDNNDTRKKEPTRGSATHNNDGWAGWDDPKDDEYENSYQSVSNKNAVGHNGKPGDRWTGGGFL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2637 455 Pfam Putative GTPase activating protein for Arf 5 94 IPR001164 GO:0005096
Prci1g2637 455 MobiDBLite consensus disorder prediction 151 168 - -
Prci1g2637 455 MobiDBLite consensus disorder prediction 364 455 - -
Prci1g2637 455 MobiDBLite consensus disorder prediction 182 198 - -
Prci1g2637 455 MobiDBLite consensus disorder prediction 118 198 - -
Prci1g2637 455 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 454 IPR044519 GO:0005096|GO:0016192
Prci1g2637 455 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Prci1g2637 455 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Prci1g2637 455 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Prci1g2637 455 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Prci1g2637 455 SMART arf_gap_3 4 120 IPR001164 GO:0005096
Prci1g2637 455 MobiDBLite consensus disorder prediction 364 392 - -
Prci1g2637 455 MobiDBLite consensus disorder prediction 393 407 - -
Prci1g2637 455 FunFam ADP-ribosylation factor GTPase-activating protein 1 129 - -
Prci1g2637 455 CDD ArfGap_ArfGap1 3 117 - -
Prci1g2637 455 SUPERFAMILY ArfGap/RecO-like zinc finger 5 108 IPR037278 -
Prci1g2637 455 Gene3D Arf GTPase activating protein 1 124 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2637 Prci-Chr1 45839589 45844487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2637 5 87 C2H2 Transcription Factor Family AT4G05330 51.190 2.54e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2637 K12492 - qsa:O6P43_010403 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2637 1 45839589 45844487 Prci1g2637 1 45839589 45844487 ECH