Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2611 ATGGAGAACCTGTTTCGCTTGGTTGATCATGAAGACTTGTTCTCTCGGCGCTGCATTTGGGTGAACGGCCCTGTCATCGTGGGAGCAGGCCCCTCCGGCCTTGCCACGGCGGCTTGTCTCAGAGAACAAGGCGTTCCTTTCATGGTTCTCGAGAGAGCCGATTGCATAGCTTCTCTCTGGCAGAACCGAACCTACGACAGGCTCAAGCTTCACCTTCCCAAGCAATTCTGTCAGCTCCCCAGAGTTCCTTTTCCAGACGACTTCCCCGAGTACCCCACAAAGCGACAATTCATCGACTACCTCGAATCATACGCCAAGCGTTTCCAGATCAATCCGCGATTCAACGAGTGCGTTCAATCCGCCAGGTACGACGAGACCTGCTGCTTGTGGAGGGTCAAGACTGTTTCCACGGTTGGCTCCTGTAGAACTGAAATGGAGTACATTTGTCGATCGCTTGTGGTGGCCACCGGCGAGAATGCCGAGTGTGTCATGCCTGATATCGAGGGGCTGGGCGAATTCAAAGGAGAAGTCGTTCACGCGTGTGATTACAAGTCAGGAGAAAGTTTCAGGGGAAAGAAAGTGCTCGTCGTGGGCTGTGGCAATTCTGGCATGGAGCTCTCTCTTGACCTCTGCAACCATAATGCATCACCTTCAATGGTTGTTCGTAGCTCTGTTCATGTATTACCCAGAGAGATTTTCGGGAAATCAACGTTCGAATTGGCCGTTATGATGTTGAAATGGCTACCTCTATGGCTAGTGGACAAGCTCCTACTGGTTCTTGCATGGTTGTTGCTCGGGAACGTTGAGAAATATGGGCTAAAACGGCCATCGACGGGCCCACTGGAGCTGAAAAACACGAAGGGGAAGACCCCTGTTCTGGATATTGGAACATTGGAGAAGATTAGATCCGGAGACATAAAAGTTGTACCAGGGATCAAGAGGCTTAGCAACCACCAAGTTGAGCTAGTCAATGGTGAAAAACTTGATGTTGATGCCGTTGTACTAGCCACTGGATATCGCAGCAATGTCCCTTCATGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGGTTCCCAAAGAGGCCATTCCCACATGGATGGAAAGGAAGTGCAGGGCTGTATGCAGTTGGGTTCACAAGGAGAGGGCTATCTGGTGCTTCATCTGATGCTACGAAAATTGCTCATGACATAGGCCAAGTTTGGAAGCAAGAGACTAGGCAAAAGAAGCACCGACCTACTGCTGGCCATAGACGATGCATTTCCCAGTTCTGA 1272 0.5031 MENLFRLVDHEDLFSRRCIWVNGPVIVGAGPSGLATAACLREQGVPFMVLERADCIASLWQNRTYDRLKLHLPKQFCQLPRVPFPDDFPEYPTKRQFIDYLESYAKRFQINPRFNECVQSARYDETCCLWRVKTVSTVGSCRTEMEYICRSLVVATGENAECVMPDIEGLGEFKGEVVHACDYKSGESFRGKKVLVVGCGNSGMELSLDLCNHNASPSMVVRSSVHVLPREIFGKSTFELAVMMLKWLPLWLVDKLLLVLAWLLLGNVEKYGLKRPSTGPLELKNTKGKTPVLDIGTLEKIRSGDIKVVPGIKRLSNHQVELVNGEKLDVDAVVLATGYRSNVPSWLQEGEFFSKNGFPKRPFPHGWKGSAGLYAVGFTRRGLSGASSDATKIAHDIGQVWKQETRQKKHRPTAGHRRCISQF 423
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2611 423 FunFam Flavin-containing monooxygenase 24 406 - -
Prci1g2611 423 Pfam Flavin-binding monooxygenase-like 26 344 IPR020946 GO:0004499|GO:0050660|GO:0050661
Prci1g2611 423 Gene3D - 24 407 IPR036188 -
Prci1g2611 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Prci1g2611 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Prci1g2611 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 25 412 - -
Prci1g2611 423 SUPERFAMILY FAD/NAD(P)-binding domain 25 301 IPR036188 -
Prci1g2611 423 SUPERFAMILY FAD/NAD(P)-binding domain 191 400 IPR036188 -
Prci1g2611 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 149 167 - -
Prci1g2611 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Prci1g2611 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci1g2611 Prci-Chr1 45647110 45649011 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2611 K11816 - gmx:100819987 734.176
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3907 3 47221173 47229254 Prci1g2611 1 45647110 45649011 CCT
Prci1g2611 1 45647110 45649011 Prci1g2611 1 45647110 45649011 ECH