Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2577 ATGCAACTGAAAATTCTGCTCTTCTTCTGTTACATTTTCTGTTTCTCTTATGGTCTTGCTGTTGTTTTGAATGATGAAGTTTCCACACTACTTTCTATAAAAGCAGGTCTTATTGATCCGTTGAATAAGCTGCAAGATTGGAAATTGCCGGACAAGGCACCAAGAAAAGATGCAGAGCCTTGTAAGTGGGTTGGTGTCTCGTGCAATGCTGCTGGAGCTGTCGAGAAGCTCGATCTATCCCACATGAATCTCAGTGGCAAAGTATCCGATGAGATACAAAGGCTACAAAGTCTCACTACTCTAAACTTATGCTGCAATGGGTTCTCCACAGCATTGCCAAAATCTGTAGCCAACCTCATCACACTGAGAAGTCTTGATGTCAGCCAGAATTTCTTCATTGGTGATTTTCCATTAGGTCTTGGAAAGGCATCACGACTTATGATTTTAAATGCATCCAGTAATGATTTCTCAGGTTTTGTTCCGGAGGATCTTGGGAATGCTTCTTCCTTAGAGACGCTAGATCTCAGAGGCAGCTTCTTCCAAGGGTCTATTCCACAATCCTTCAGTAGGTTGCGGAAGCTGAGGTTCCTTGGTCTTTCTGGAAATAATCTCACTGGAGAAATTCCAGGTGAGCTGGGGCAGCTTTCCTCACTGGAGCATATGATTCTCGGGTACAATGCTTTTGAGGGTGGGATTCCCAGAGAGTTTGGAAACCTCACCAATCTTAAGTATCTTGATGTGGCCGAAGGCAATCTTGGAGGTGAAATTCCAGCTGAATTGGGAAACCTGAAATTACTAAACACGGTTTTCTTATACAAAAACAACTTTAAAGGCAGAATTCCTCCTGCTCTGTGCAATCTGACTTCATTGGTGTTGCTGGATTTCTCTGACAACATGCTATCAGGAAAAATTCCACCTGAAATTGGCCAACTGAAGAATTTAGAGCTCCTAAATTTCATGAGCAACCTTCTATCTGGTCCTGTGCCTTCTGAACTTGGGGATTTGCCTCAACTGAAGGTTCTTGAGCTATGGAAAAATTCCTTGTCAGGGACATTGCCAAATCGCTTGGGCAAAAGTTCACCATTGCAGTGGCTTGATGTATCATCGAACTTCATCTCTGGTGAGATTCCAGAAACACTTTGCAGCCAGGGCAATCTCACCAAGCTTATTCTTTTCAATAATGCCTTCACAGGTCCAATTCCAGTCAACATATCAATGTGCCCTTCACTAGTTCGTGTTCGAATTCATAACAATTTACTTAATGGATCAATTCCGGTTGGCTTTGGGAAACTTGGGAATCTTGAAAGGTTAGAATTGGCTAACAACAGTCTCACTGGTGAAATTCCTAATGACATTGCTTCTTCCACATCCCTTTCTTTCATTGATTTCTCCAGAAACAACCTCCATTCTTCTCTCCCTTCTACCATTTTTTCCACTCCGAATCTCCAATCATTCATGGTCTCCCACAACAATTTGGAAGGTGAAATCCCAGACCAATGTCAGGACTGTCCTTCACTTGGTGTTCTTGATCTCTCATCAAATCGTCTCTCTGGAAGCATTCCAGATAGCATTGCTTCTTGTCAGAAATTGGTAAACTTGAACCTAAAGAACAACCAATTGACTGGTAAAATCCCAAAAGCTCTAGCCAACATGCCTTCACTGGCCATTCTTGATTTTTCCAACAACTCTCTCACTGGTCAGATACCTGATAGCTTTGGTATTTCTCCTGCTCTCGAAGCTCTCAATGTCTCATGCAACCAGCTTGAGGGTCCCGTCCCAACAAATGGCATGCTAAGAACCATCAACCCAAGTGATCTCATGGGTAATGCTGGCCTATGCGGTGGCATCCTCCCTCCATGTGGCCAAAACTCTGCATATTCATTGAAGCATGGGAGCTCACGAGCAAGACACATAATCACAGGATGGGTCATTGGAATATCATCAGTATTGGCTATTGGGATTGCCATTTTTGTTGCTAGATCTATATACATAAGGTGGTACTCTGATGGCTTCCGCAACGGTGAAAAGATTTATAAGGGTGACAAAAGGTGGCCCTGGAGATTGATGGCATTTCAGAGGCTTAATTTTACAAGCACTGAAATTCTAGCTTGCATTAAGGAAACAAATGTGATTGGAATGGGAGCAACTGGGGTTGTTTATAAGGCTGAACTGTCACAGTCAAATACAGTTGTGGCGGTGAAAAAGTTGTGGACATCAGGATCTGATACTGAAGTAGGAAGTAATGATGACCTGGTTGGAGAGGTGAATCTATTGGGCAGGCTAAGACATAGAAATATCGTTAGACTATTGGGATACCTTTATAACGACATTGATGTTATGATGGTTTATGAATTTATGTCCAATGGAAACCTTGGAGATGCCTTGCATGGCAAACAAGCTGGAAGGTTGCTTGTAGACTGGGCTTCCCGATATAACATATCTCTAGGAATTGCGCAAGGGCTTGCTTATCTTCATCATGACTATCATCCACCGGTCATCCACCGCGACATCAAGTCAAATAACATACTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGATTAGCCAAAATGATGACTGGGAAGAATGAAACTGTCTCCATGATTGCTGGGTCCTACGGCTACATTGCCCCAGAGTATGGATATACCTTGAAGGTGGATGAAAAGATTGACACTTACAGTTATGGAGTAGTTCTGTTGGAGCTTCTCACAGGAAAGAGTCCACTGGATTCTGAGTTTGGAGAATCTGTGGACATTGTTGAGTGGATTAGGAGGAAGATTAGAGACAACAAGCCTCTAGAAGAAGCATTAGATCCAAGTGTAGGAAATTGCAGGCATGTTGTAGAGGAGATGCTTTTAGTTCTTAGAATAGCACTTCTTTGCACCGCAAAGCTACCCAAGGACAGACCCTCCATGAGAGATGTGATAATGATGCTTGAAGAGGCAAAGCCTCGGAGTAAAAGCGATAGCAACAATAAAAAAGATGAAGCTAATAAGATGACGCCAGTTTTTAGCACATCATCTCTAGTTGGCGGCCTTGTGTAG 3051 0.4281 MQLKILLFFCYIFCFSYGLAVVLNDEVSTLLSIKAGLIDPLNKLQDWKLPDKAPRKDAEPCKWVGVSCNAAGAVEKLDLSHMNLSGKVSDEIQRLQSLTTLNLCCNGFSTALPKSVANLITLRSLDVSQNFFIGDFPLGLGKASRLMILNASSNDFSGFVPEDLGNASSLETLDLRGSFFQGSIPQSFSRLRKLRFLGLSGNNLTGEIPGELGQLSSLEHMILGYNAFEGGIPREFGNLTNLKYLDVAEGNLGGEIPAELGNLKLLNTVFLYKNNFKGRIPPALCNLTSLVLLDFSDNMLSGKIPPEIGQLKNLELLNFMSNLLSGPVPSELGDLPQLKVLELWKNSLSGTLPNRLGKSSPLQWLDVSSNFISGEIPETLCSQGNLTKLILFNNAFTGPIPVNISMCPSLVRVRIHNNLLNGSIPVGFGKLGNLERLELANNSLTGEIPNDIASSTSLSFIDFSRNNLHSSLPSTIFSTPNLQSFMVSHNNLEGEIPDQCQDCPSLGVLDLSSNRLSGSIPDSIASCQKLVNLNLKNNQLTGKIPKALANMPSLAILDFSNNSLTGQIPDSFGISPALEALNVSCNQLEGPVPTNGMLRTINPSDLMGNAGLCGGILPPCGQNSAYSLKHGSSRARHIITGWVIGISSVLAIGIAIFVARSIYIRWYSDGFRNGEKIYKGDKRWPWRLMAFQRLNFTSTEILACIKETNVIGMGATGVVYKAELSQSNTVVAVKKLWTSGSDTEVGSNDDLVGEVNLLGRLRHRNIVRLLGYLYNDIDVMMVYEFMSNGNLGDALHGKQAGRLLVDWASRYNISLGIAQGLAYLHHDYHPPVIHRDIKSNNILLDANLEARIADFGLAKMMTGKNETVSMIAGSYGYIAPEYGYTLKVDEKIDTYSYGVVLLELLTGKSPLDSEFGESVDIVEWIRRKIRDNKPLEEALDPSVGNCRHVVEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLEEAKPRSKSDSNNKKDEANKMTPVFSTSSLVGGLV 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2577 1016 Pfam Leucine Rich Repeat 433 452 IPR001611 GO:0005515
Prci1g2577 1016 SMART serkin_6 705 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2577 1016 FunFam MDIS1-interacting receptor like kinase 1 790 1000 - -
Prci1g2577 1016 Pfam Protein kinase domain 707 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2577 1016 SUPERFAMILY RNI-like 256 594 - -
Prci1g2577 1016 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 23 178 - -
Prci1g2577 1016 Gene3D Ribonuclease Inhibitor 334 627 IPR032675 -
Prci1g2577 1016 ProSiteProfiles Protein kinase domain profile. 705 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2577 1016 PANTHER RECEPTOR-LIKE PROTEIN 55 353 985 - -
Prci1g2577 1016 Gene3D Phosphorylase Kinase; domain 1 705 789 - -
Prci1g2577 1016 Gene3D Ribonuclease Inhibitor 267 333 IPR032675 -
Prci1g2577 1016 Gene3D Ribonuclease Inhibitor 199 266 IPR032675 -
Prci1g2577 1016 MobiDBLite consensus disorder prediction 983 998 - -
Prci1g2577 1016 MobiDBLite consensus disorder prediction 983 1003 - -
Prci1g2577 1016 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 364 624 - -
Prci1g2577 1016 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 179 279 - -
Prci1g2577 1016 FunFam Leucine-rich repeat receptor protein kinase EMS1 280 363 - -
Prci1g2577 1016 Gene3D Ribonuclease Inhibitor 23 187 IPR032675 -
Prci1g2577 1016 SUPERFAMILY Protein kinase-like (PK-like) 699 982 IPR011009 -
Prci1g2577 1016 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Prci1g2577 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Prci1g2577 1016 Pfam Leucine rich repeat N-terminal domain 24 69 IPR013210 -
Prci1g2577 1016 Pfam Leucine rich repeat 145 204 IPR001611 GO:0005515
Prci1g2577 1016 Pfam Leucine rich repeat 480 540 IPR001611 GO:0005515
Prci1g2577 1016 Gene3D Transferase(Phosphotransferase) domain 1 790 1010 - -
Prci1g2577 1016 SUPERFAMILY L domain-like 23 301 - -
Prci1g2577 1016 FunFam MDIS1-interacting receptor like kinase 1 705 789 - -
Prci1g2577 1016 SMART LRR_typ_2 503 527 IPR003591 -
Prci1g2577 1016 SMART LRR_typ_2 551 575 IPR003591 -
Prci1g2577 1016 SMART LRR_typ_2 431 455 IPR003591 -
Prci1g2577 1016 SMART LRR_typ_2 456 479 IPR003591 -
Prci1g2577 1016 SMART LRR_typ_2 335 359 IPR003591 -
Prci1g2577 1016 SMART LRR_typ_2 191 215 IPR003591 -
Prci1g2577 1016 SMART LRR_typ_2 287 311 IPR003591 -
Prci1g2577 1016 SMART LRR_typ_2 95 119 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2577 Prci-Chr1 45467323 45472137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2577 1 1013 Receptor kinase-like Gene Family AT1G08590 58.761 0.0 1155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci1g2577 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2577 - - gmx:100811284 1622.06