Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2574 ATGAATCTCAGTGGCAAAGTATCCGATGAGATACAAAGGCTACAAAGTCTCACTACTCTAAACTTATGCTGCAATGGGTTCTCCACAGCATTGCCAAAATCTGTAGCCAACCTCATCACACTGAGAAGTCTTGATGTCAGCCAGAATTTCTTCATTGGTGATTTTCCATTAGGTCTTGGAAAGGCATCACGACTTATGATTTTAAATGCATCCAGTAATGATTTCTCAGGTTTTGTTCCGGAGGATCTTGGGAATGCTTCTTCCTTAGAGACGCTAGATCTCAGAGGCAGCTTCTTCCAAGGGTCTATTCCACAATCCTTCAGTAGGTTGCGGAAGCTGAGGTTCCTTGGTCTTTCTGGAAATAATCTCACTGGAGAAATTCCAGGTGAGCTGGGGCAGCTTTCCTCACTGGAGCATATGATTCTCGGGTACAATGCTTTTGAGGGTGGGATTCCCAGAGAGTTTGGAAACCTCACCAATCTTAAGTATCTTGATGTGGCCGAAGGCAATCTTGGAGGTGAAATTCCAGCTGAATTGGGAAACCTGAAATTACTAAACACGGTTTTCTTATACAAAAACAACTTTAAAGGCAGAATTCCTCCTGCTCTGTGCAATCTGACTTCATTGGTGTTGCTGGATTTCTCTGACAACATGCTATCAGGAAAAATTCCACCTGAAATTGGCCAACTGAAGAATTTAGAGCTCCTAAATTTCATGAGCAACCTTCTATCTGGTCCTGTGCCTTCTGAACTTGGGGATTTGCCTCAACTGAAGGTTCTTGAGCTATGGAAAAATTCCTTGTCAGGGACATTGCCAAATCGCTTGGGCAAAAGTTCACCATTGCAGTGGCTTGATGTATCATCGAACTTCATCTCTGGTGAGATTCCAGAAACACTTTGCAGCCAGGGCAATCTCACCAAGCTTATTCTTTTCAATAATGCCTTCACAGGTCCAATTCCAGTCAACATATCAATGTGCCCTTCACTAGTTCGTGTTCGAATTCATAACAATTTACTTAATGGATCAATTCCGGTTGGCTTTGGGAAACTTGGGAATCTTGAAAGGTTAGAATTGGCTAACAACAGTCTCACTGGTGAAATTCCTAATGACATTGCTTCTTCCACATCCCTTTCTTTCATTGATTTCTCCAGAAACAACCTCCATTCTTCTCTCCCTTCTACCATTTTTTCCACTCCGAATCTCCAATCATTCATGGTCTCCCACAACAATTTGGAAGGTGAAATCCCAGACCAATGTCAGGACTGTCCTTCACTTGGTGTTCTTGATCTCTCATCAAATCGTCTCTCTGGAAGCATTCCAGATAGCATTGCTTCTTGTCAGAAATTGGTAAACTTGAACCTAAAGAACAACCAATTGACTGGTAAAATCCCAAAAGCTCTAGCCAACATGCCTTCACTGGCCATTCTTGATTTTTCCAACAACTCTCTCACTGGTCAGATACCTGATAGCTTTGGTATTTCTCCTGCTCTCGAAGCTCTCAATGTCTCATGCAACCAGCTTGAGGGTCCCGTCCCAACAAATGGCATGCTAAGAACCATCAACCCAAGTGATCTCATGGGTAATGCTGGCCTATGCGGTGGCATCCTCCCTCCATGTGGCCAAAACTCTGCATATTCATTGAAGCATGGGAGCTCACGAGCAAGACACATAATCACAGGATGGGTCATTGGAATATCATCAGTATTGGCTATTGGGATTGCCATTTTTGTTGCTAGATCTATATACATAAGGTGGTACTCTGATGGCTTCCGCAACGGTGAAAAGATTTATAAGGGTGACAAAAGGTGGCCCTGGAGATTGATGGCATTTCAGAGGCTTAATTTTACAAGCACTGAAATTCTAGCTTGCATTAAGGAAACAAATGTGATTGGAATGGGAGCAACTGGGGTTGTTTATAAGGCTGAACTGTCACAGTCAAATACAGTTGTGGCGGTGAAAAAGTTGTGGACATCAGGATCTGATACTGAAGTAGGAAGTAATGATGACCTGGTTGGAGAGGTGAATCTATTGGGCAGGCTAAGACATAGAAATATCGTTAGACTATTGGGATACCTTTATAACGACATTGATGTTATGATGGTTTATGAATTTATGTCCAATGGAAACCTTGGAGATGCCTTGCATGGCAAACAAGCTGGAAGGTTGCTTGTAGACTGGGCTTCCCGATATAACATATCTCTAGGAATTGCGCAAGGGCTTGCTTATCTTCATCATGACTATCATCCACCGGTCATCCACCGCGACATCAAGTCAAATAACATACTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGATTAGCCAAAATGATGACTGGGAAGAATGAAACTGTCTCCATGATTGCTGGGTCCTACGGCTACATTGCCCCAGAGTATGGATATACCTTGAAGGTGGATGAAAAGATTGACACTTACAGTTATGGAGTAGTTCTGTTGGAGCTTCTCACAGGAAAGAGTCCACTGGATTCTGAGTTTGGAGAATCTGTGGACATTGTTGAGTGGATTAGGAGGAAGATTAGAGACAACAAGCCTCTAGAAGAAGCATTAGATCCAAGTGTAGGAAATTGCAGGCATGTTGTAGAGGAGATGCTTTTAGTTCTTAGAATAGCACTTCTTTGCACCGCAAAGCTACCCAAGGACAGACCCTCCATGAGAGATGTGATAATGATGCTTGAAGAGGCAAAGCCTCGGAGTAAAAGCGATAGCAACAATAAAAAAGATGAAGCTAATAAGATGACGCCAGTTTTTAGCACATCATCTCTAGTTGGCGGCCTTGTGTAG 2808 0.4284 MNLSGKVSDEIQRLQSLTTLNLCCNGFSTALPKSVANLITLRSLDVSQNFFIGDFPLGLGKASRLMILNASSNDFSGFVPEDLGNASSLETLDLRGSFFQGSIPQSFSRLRKLRFLGLSGNNLTGEIPGELGQLSSLEHMILGYNAFEGGIPREFGNLTNLKYLDVAEGNLGGEIPAELGNLKLLNTVFLYKNNFKGRIPPALCNLTSLVLLDFSDNMLSGKIPPEIGQLKNLELLNFMSNLLSGPVPSELGDLPQLKVLELWKNSLSGTLPNRLGKSSPLQWLDVSSNFISGEIPETLCSQGNLTKLILFNNAFTGPIPVNISMCPSLVRVRIHNNLLNGSIPVGFGKLGNLERLELANNSLTGEIPNDIASSTSLSFIDFSRNNLHSSLPSTIFSTPNLQSFMVSHNNLEGEIPDQCQDCPSLGVLDLSSNRLSGSIPDSIASCQKLVNLNLKNNQLTGKIPKALANMPSLAILDFSNNSLTGQIPDSFGISPALEALNVSCNQLEGPVPTNGMLRTINPSDLMGNAGLCGGILPPCGQNSAYSLKHGSSRARHIITGWVIGISSVLAIGIAIFVARSIYIRWYSDGFRNGEKIYKGDKRWPWRLMAFQRLNFTSTEILACIKETNVIGMGATGVVYKAELSQSNTVVAVKKLWTSGSDTEVGSNDDLVGEVNLLGRLRHRNIVRLLGYLYNDIDVMMVYEFMSNGNLGDALHGKQAGRLLVDWASRYNISLGIAQGLAYLHHDYHPPVIHRDIKSNNILLDANLEARIADFGLAKMMTGKNETVSMIAGSYGYIAPEYGYTLKVDEKIDTYSYGVVLLELLTGKSPLDSEFGESVDIVEWIRRKIRDNKPLEEALDPSVGNCRHVVEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLEEAKPRSKSDSNNKKDEANKMTPVFSTSSLVGGLV 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2574 935 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 92 895 - -
Prci1g2574 935 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 283 543 - -
Prci1g2574 935 FunFam Leucine-rich repeat receptor protein kinase EMS1 199 282 - -
Prci1g2574 935 SMART LRR_typ_2 254 278 IPR003591 -
Prci1g2574 935 SMART LRR_typ_2 422 446 IPR003591 -
Prci1g2574 935 SMART LRR_typ_2 206 230 IPR003591 -
Prci1g2574 935 SMART LRR_typ_2 350 374 IPR003591 -
Prci1g2574 935 SMART LRR_typ_2 375 398 IPR003591 -
Prci1g2574 935 SMART LRR_typ_2 110 134 IPR003591 -
Prci1g2574 935 SMART LRR_typ_2 14 38 IPR003591 -
Prci1g2574 935 SMART LRR_typ_2 470 494 IPR003591 -
Prci1g2574 935 SUPERFAMILY L domain-like 2 225 - -
Prci1g2574 935 FunFam MDIS1-interacting receptor like kinase 1 624 708 - -
Prci1g2574 935 SUPERFAMILY RNI-like 175 512 - -
Prci1g2574 935 Pfam Leucine rich repeat 64 123 IPR001611 GO:0005515
Prci1g2574 935 Pfam Leucine rich repeat 399 459 IPR001611 GO:0005515
Prci1g2574 935 ProSitePatterns Protein kinases ATP-binding region signature. 630 654 IPR017441 GO:0005524
Prci1g2574 935 Gene3D Ribonuclease Inhibitor 1 106 IPR032675 -
Prci1g2574 935 Gene3D Ribonuclease Inhibitor 253 546 IPR032675 -
Prci1g2574 935 SMART serkin_6 624 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2574 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Prci1g2574 935 ProSiteProfiles Protein kinase domain profile. 624 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2574 935 SUPERFAMILY Protein kinase-like (PK-like) 618 901 IPR011009 -
Prci1g2574 935 Pfam Protein kinase domain 626 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2574 935 MobiDBLite consensus disorder prediction 902 922 - -
Prci1g2574 935 Gene3D Phosphorylase Kinase; domain 1 623 708 - -
Prci1g2574 935 MobiDBLite consensus disorder prediction 902 917 - -
Prci1g2574 935 Gene3D Ribonuclease Inhibitor 112 185 IPR032675 -
Prci1g2574 935 Gene3D Ribonuclease Inhibitor 186 252 IPR032675 -
Prci1g2574 935 Gene3D Transferase(Phosphotransferase) domain 1 709 929 - -
Prci1g2574 935 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 97 198 - -
Prci1g2574 935 Pfam Leucine Rich Repeat 352 371 IPR001611 GO:0005515
Prci1g2574 935 FunFam MDIS1-interacting receptor like kinase 1 709 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2574 Prci-Chr1 45467323 45472767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2574 1 932 Receptor kinase-like Gene Family AT1G08590 60.612 0.0 1104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci1g2574 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2574 - - gmx:100811284 1511.89