Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2573 ATGCAGGGTGGTTCTACTGATGGATCGATGTCAACGGTGTCAAAGGAAGATAATTTGTTCATTTCATCTGAGGATTCTTCGTGCCCAGACGAGTCTGAGCTTGAATTGGGTCTTGGGCTAAGCCTTTCTCGTCGTCCTGGGGTGAAGTCCCGACCAACTTCCACGAATCAACATGCTAGAATATTAACCGCTAAAGATTTTCTTTCTATGGCTTCTTCGCATGCTGCAGCTTCATTGGCCTCATCAACATCCTCCCCATCTTCTTCCTCTTCCTCTCCTTCCTCAGTGACCAGGCCTAATGTCACTGCTGGTACCAAGAGAACTTCTGATTCTGTTGTTGCTACTAATGGCCTCAGTCAGGTTGTAGGATGGCCTCCCCTTGGAGCATATCGGATGAATAGCTTTAACAATCATGCAAAGTCACCAGCGGGCACTAAAGTGTTCAACTCAGTGGTTGAGAAAAGTAAGAACAATGAAACAGAGGCGAGGAAAAATACTGATAACGGCATCAATAAAAGTGATGTCAGTGCCAAAGGTGAAGGGAACCTCAAGAGTTCCCGGTTTGTGAAGGTAAATATGGATGGGTTACTGATTGGAAGGAAGGTTGATTTGAGTGCTCATAATTCCTATGAAAGCTTGGCACTTACTTTGGAGGAGATGTTCGATGAACATTTTGCGGCTGTCAATAGTAAAATAGGATCAACTGGGGAAGAACATGGCGCTGTAGTTGGATCAGAAAGAAGGTCAAAATTGCTGGATGCATCTTCCAAGTTTGCACTGACTTATGAAGACAAGGATGGAGACTGGATGCTAGTTGGAGACGTACCTTGGGGGATGTTTCTAAGCTGTGTGAGGAGGCTAAAAATCATGAGAACATCTGAGGCTAAGGGACTTGCACCAATGTGTGAAGGTAAGAACAGCAGACAGAGAAGTTAG 936 0.4498 MQGGSTDGSMSTVSKEDNLFISSEDSSCPDESELELGLGLSLSRRPGVKSRPTSTNQHARILTAKDFLSMASSHAAASLASSTSSPSSSSSSPSSVTRPNVTAGTKRTSDSVVATNGLSQVVGWPPLGAYRMNSFNNHAKSPAGTKVFNSVVEKSKNNETEARKNTDNGINKSDVSAKGEGNLKSSRFVKVNMDGLLIGRKVDLSAHNSYESLALTLEEMFDEHFAAVNSKIGSTGEEHGAVVGSERRSKLLDASSKFALTYEDKDGDWMLVGDVPWGMFLSCVRRLKIMRTSEAKGLAPMCEGKNSRQRS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2573 311 MobiDBLite consensus disorder prediction 1 58 - -
Prci1g2573 311 Pfam AUX/IAA family 34 300 IPR033389 -
Prci1g2573 311 ProSiteProfiles PB1 domain profile. 186 297 IPR000270 GO:0005515
Prci1g2573 311 MobiDBLite consensus disorder prediction 155 178 - -
Prci1g2573 311 MobiDBLite consensus disorder prediction 1 27 - -
Prci1g2573 311 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 33 296 IPR003311 GO:0005634|GO:0006355
Prci1g2573 311 MobiDBLite consensus disorder prediction 80 112 - -
Prci1g2573 311 SUPERFAMILY CAD & PB1 domains 182 290 - -
Prci1g2573 311 Gene3D - 181 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2573 Prci-Chr1 45447995 45452283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2573 170 300 B3 DNA Binding Superfamily AT1G59750 30.345 1.02e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci1g2573 AUX_IAA 6e-57 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2573 K14484 - gmx:100779400 321.627