Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2572 ATGCAGGGTGGTTCTACTGATGGATCGATGTCAACGGTGTCAAAGGAAGATAATTTGTTCATTTCATCTGAGGATTCTTCGTGCCCAGACGAGTCTGAGCTTGAATTGGGTCTTGGGCTAAGCCTTTCTCGTCGTCCTGGGGTGAAGTCCCGACCAACTTCCACGAATCAACATGCTAGAATATTAACCGCTAAAGATTTTCTTTCTATGGCTTCTTCGCATGCTGCAGCTTCATTGGCCTCATCAACATCCTCCCCATCTTCTTCCTCTTCCTCTCCTTCCTCAGTGACCAGGCCTAATGTCACTGCTGGTACCAAGAGAACTTCTGATTCTGTTGTTGCTACTAATGGCCTCAGTCAGGTTGTAGGATGGCCTCCCCTTGGAGCATATCGGATGAATAGCTTTAACAATCATGCAAAGTCACCAGCGGGCACTAAAGTGTTCAACTCAGTGGTTGAGAAAAGTAAGAACAATGAAACAGAGGCGAGGAAAAATACTGATAACGGCATCAATAAAAGTGATGTCAGTGCCAAAGGTGAAGGGAACCTCAAGAGTTCCCGGTTTGTGAAGGTAAATATGGATGGGTTACTGATTGGAAGGAAGGTTGATTTGAGTGCTCATAATTCCTATGAAAGCTTGGCACTTACTTTGGAGGAGATGTTCGATGAACATTTTGCGGCTGTCAATAGTAAAAGATCAACTGGGGAAGAACATGGCGCTGTAGTTGGATCAGAAAGAAGGTCAAAATTGCTGGATGCATCTTCCAAGTTTGCACTGACTTATGAAGACAAGGATGGAGACTGGATGCTAGTTGGAGACGTACCTTGGGGGATGTTTCTAAGCTGTGTGAGGAGGCTAAAAATCATGAGAACATCTGAGGCTAAGGGACTTGCACCAATGTGTGAAGGTAAGAACAGCAGACAGAGAAGTTAG 933 0.4502 MQGGSTDGSMSTVSKEDNLFISSEDSSCPDESELELGLGLSLSRRPGVKSRPTSTNQHARILTAKDFLSMASSHAAASLASSTSSPSSSSSSPSSVTRPNVTAGTKRTSDSVVATNGLSQVVGWPPLGAYRMNSFNNHAKSPAGTKVFNSVVEKSKNNETEARKNTDNGINKSDVSAKGEGNLKSSRFVKVNMDGLLIGRKVDLSAHNSYESLALTLEEMFDEHFAAVNSKRSTGEEHGAVVGSERRSKLLDASSKFALTYEDKDGDWMLVGDVPWGMFLSCVRRLKIMRTSEAKGLAPMCEGKNSRQRS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2572 310 MobiDBLite consensus disorder prediction 1 58 - -
Prci1g2572 310 MobiDBLite consensus disorder prediction 155 178 - -
Prci1g2572 310 MobiDBLite consensus disorder prediction 1 27 - -
Prci1g2572 310 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 33 295 IPR003311 GO:0005634|GO:0006355
Prci1g2572 310 SUPERFAMILY CAD & PB1 domains 182 289 - -
Prci1g2572 310 Pfam AUX/IAA family 34 299 IPR033389 -
Prci1g2572 310 ProSiteProfiles PB1 domain profile. 186 296 IPR000270 GO:0005515
Prci1g2572 310 Gene3D - 181 302 - -
Prci1g2572 310 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2572 Prci-Chr1 45447993 45452283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2572 170 299 B3 DNA Binding Superfamily AT1G59750 30.556 7.18e-14 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci1g2572 AUX_IAA 3.6e-57 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2572 K14484 - gmx:100779400 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2572 1 45447993 45452283 Prci3g3175 3 42915909 42918792 CCT
Prci1g2572 1 45447993 45452283 Prci1g2572 1 45447993 45452283 ECH