Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2564 ATGGCACCCAATCCAAGAGTTGCAGCAGCCTATCGTGCAATGACTGTTCTTGGCATTAAGGAAGTAAAAGTGAAACCAGTATTGAAGCAACTTCTTAAACTGTATGACAAGAACTGGGAACTTATTGAACAAGAGAACTATAGAGTTCTTGCAGATGCTATATTTGAGCAGGAGGAAAAAGAGTTGCAGGGAAAGAGGACAAAAAACCAGAACAATGATGAAGGAGAAATGGAGGATGAAGAAGCTCAAATGCAGGATGAACCGGTGCGACCTTTGAAGAGGCTGCGTTTAAGAGGCCAAGAGAATCAGGCTTCTCATCCTCTGAGTATTTGTGGAACCAGCTCAGCTGCCTCCCCATCTAAAATGCCTAAAGTAGAAGATGAATTGCCTGATAGTTGTTCCAATAGAAATGCAGAGACTGGCATTCGCCCTGTTCCAGTGCGAGATAGTAGTGTTGACAAGGGAAAGCAACCTTTATCACCTCAAACTGCTCCTGGGGGAAGAAGACTTCGATCTGAAAAAGCATCTCCGTCTGTATCATTTAAGGAACCTCCAGCTGAACAGAGAATTGTGCCATTACAGAAAAACCAGTTGCCCTATACTCTTGCATTAATCAAGCCTAAAGATGAGCCTGTTGATGAACTGGTAGATTATGATGCTCCCAGTGCAGCAATTCATCCTGAACTGCCTGGTGGAAGAGATCCTCCAATGCGGCATGATGCAACTAGAAAACAAGACAAGAATGGTCCTTTAATATCAAAATGCCGAGATGAAGGTAGAGGGAAAGGTATTCGAGATTCATCAAATGAAGTGAACCATGAGGTTGCAACAAACCAAGAATCTTCTACCATTGAGATAGCCTCCTCAACGTCAGGAGAGGAAGGATCTGAAATGATGCCATCAAGTCTAAATGTGTTGAAGGAATCTAAGGCATGTGATGCTCTGATTATCAGAGGCAATACAGAAGATTTAGGATTGCATTCTGGCATGTCAAATGGATCAATCAACATTCAGTCTTCTTCTGCACTTGCTGCATCTTGCATTTCCCCTTCTTCCCCGCTTTTGAGTGGTACGAATGATGCTGTACTAGTCACCAAGAAGGTCAGAAGTGATTTTCCAGAGTGTGATGGTGGAAAGGGGCTGGAGGATCCTATATCACCACATTCAGGCAGTTTGGTGGTTATTCAACAGCATCAGCTTACTCCCGATGATCTAAGGTCTCTTCATGGTGCTGATGACCTTTCAAAAGGAGAAGAAAATCTAAGAATTCCATGGGTGAATGAAATAACGAATGATTTCCCTCCACCTTTTCACTATCTGCACCAAAGCGTTGGTTTCAAAGATGCCTATGTTAACTGGTGTCTTTCAAACATCAAATGTGAGGATTACTGTTCAACTTGTTTGGGCGATTGTCTTCTGTCCCCAACATCTTGTGTTTGTGCAAATAAAATTGGGGGTGGATATGCTTACACATCTGAAGGGCTACTGAATGAAAAATTCTTGGAAGAGTGTATTACCATTAGCCGCAATCCTCAACAACATCAGTCCTATTGTAAAATCTGCCCCCTTGAAAGAGCAAAGAACGATGATTGTTTAGAACCATGTAAAGGACACTTAAAGAGAAAGTTTATCAAAGAATGTTGGGTAAAATGTGGTTGTGTGAAACAGTGTGGCAATAGGGTTGTCCAACGAGGAATCACATTCAAATTGCAGGTGTTTTTTACTTCAGAAAGAAAAGGATGGGGTCTTCGTACCTTAGAGGAGCTTCCAAAAGGTGCATTTGTGTGTGAGTTTGTGGGAGAAATATTAACCATCAAAGAGTTGCATGAGAGGAACATGCAATGTGCCCAAAATGAAACGTACACATACCCAGTTCTATTAGATGCAGGTTGGGATTCAGGAGTTGTAAATGATAAAGAAGCTCTTTGCTTGGATTCAGCATCTTATGGGAATATTGCCAGGTTTATAAACCACAGATGTTTGGATGCAAATTTGATTGAGATCCCAGTTGAAGTTGAAACCTCAGACCATCGCTACTTTCATCTTGCCTTCTTCACATCCAGGAAAGTGGCTGCACTGGAAGAGCTAACTTGGGATTATGGCATTGACTTTGATGACAATGAGGGTCCTGTCAAGCCTTTCTCTTGCAGATGTGGCAGCAAATTCTGCAGGAAGATGAAGCGATCAAATAGATCCAATAGATCTGCGTCGATTGCATGA 2220 0.4216 MAPNPRVAAAYRAMTVLGIKEVKVKPVLKQLLKLYDKNWELIEQENYRVLADAIFEQEEKELQGKRTKNQNNDEGEMEDEEAQMQDEPVRPLKRLRLRGQENQASHPLSICGTSSAASPSKMPKVEDELPDSCSNRNAETGIRPVPVRDSSVDKGKQPLSPQTAPGGRRLRSEKASPSVSFKEPPAEQRIVPLQKNQLPYTLALIKPKDEPVDELVDYDAPSAAIHPELPGGRDPPMRHDATRKQDKNGPLISKCRDEGRGKGIRDSSNEVNHEVATNQESSTIEIASSTSGEEGSEMMPSSLNVLKESKACDALIIRGNTEDLGLHSGMSNGSINIQSSSALAASCISPSSPLLSGTNDAVLVTKKVRSDFPECDGGKGLEDPISPHSGSLVVIQQHQLTPDDLRSLHGADDLSKGEENLRIPWVNEITNDFPPPFHYLHQSVGFKDAYVNWCLSNIKCEDYCSTCLGDCLLSPTSCVCANKIGGGYAYTSEGLLNEKFLEECITISRNPQQHQSYCKICPLERAKNDDCLEPCKGHLKRKFIKECWVKCGCVKQCGNRVVQRGITFKLQVFFTSERKGWGLRTLEELPKGAFVCEFVGEILTIKELHERNMQCAQNETYTYPVLLDAGWDSGVVNDKEALCLDSASYGNIARFINHRCLDANLIEIPVEVETSDHRYFHLAFFTSRKVAALEELTWDYGIDFDDNEGPVKPFSCRCGSKFCRKMKRSNRSNRSASIA 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2564 739 Pfam Pre-SET motif 415 560 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci1g2564 739 Gene3D SET domain 414 726 IPR046341 -
Prci1g2564 739 MobiDBLite consensus disorder prediction 232 269 - -
Prci1g2564 739 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 735 - -
Prci1g2564 739 ProSiteProfiles SET domain profile. 568 701 IPR001214 GO:0005515
Prci1g2564 739 MobiDBLite consensus disorder prediction 100 188 - -
Prci1g2564 739 Pfam SET domain 580 701 IPR001214 GO:0005515
Prci1g2564 739 Gene3D - 1 60 IPR043017 -
Prci1g2564 739 MobiDBLite consensus disorder prediction 102 120 - -
Prci1g2564 739 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Prci1g2564 739 MobiDBLite consensus disorder prediction 223 298 - -
Prci1g2564 739 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 739 IPR025776 -
Prci1g2564 739 CDD SET_SETDB-like 435 701 - -
Prci1g2564 739 SMART preset_2 411 552 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci1g2564 739 SMART set_7 568 707 IPR001214 GO:0005515
Prci1g2564 739 MobiDBLite consensus disorder prediction 61 88 - -
Prci1g2564 739 MobiDBLite consensus disorder prediction 270 298 - -
Prci1g2564 739 SUPERFAMILY SET domain 420 725 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2564 Prci-Chr1 45364753 45370863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2564 544 726 C2H2 Transcription Factor Family AT2G23740 39.683 3.42e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci1g2564 Pre-SET 3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2564 - - qsa:O6P43_010458 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3986 3 47622340 47632157 Prci1g2564 1 45364753 45370863 CCT
Prci1g2564 1 45364753 45370863 Prci1g2564 1 45364753 45370863 ECH