Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2563 ATGGCACCCAATCCAAGAGTTGCAGCAGCCTATCGTGCAATGACTGTTCTTGGCATTAAGGAAGTAAAAGTGAAACCAGTATTGAAGCAACTTCTTAAACTGTATGACAAGAACTGGGAACTTATTGAACAAGAGAACTATAGAGTTCTTGCAGATGCTATATTTGAGCAGGAGGAAAAAGAGTTGCAGGGAAAGAGGACAAAAAACCAGAACAATGATGAAGGAGAAATGGAGGATGAAGAAGCTCAAATGCAGGATGAACCGGTGCGACCTTTGAAGAGGCTGCGTTTAAGAGGCCAAGAGAATCAGGCTTCTCATCCTCTGAGTATTTGTGGAACCAGCTCAGCTGCCTCCCCATCTAAAATGCCTAAAGTAGAAGATGAATTGCCTGATAGTTGTTCCAATAGAAATGCAGAGACTGGCATTCGCCCTGTTCCAGTGCGAGATAGTAGTGTTGACAAGGGAAAGCAACCTTTATCACCTCAAACTGCTCCTGGGGGAAGAAGACTTCGATCTGAAAAAGCATCTCCGTCTGTATCATTTAAGGAACCTCCAGCTGAACAGAGAATTGTGCCATTACAGAAAAACCAGTTGCCCTATACTCTTGCATTAATCAAGCCTAAAGATGAGCCTGTTGATGAACTGGTAGATTATGATGCTCCCAGTGCAGCAATTCATCCTGAACTGCCTGGTGGAAGAGATCCTCCAATGCGGCATGATGCAACTAGAAAACAAGACAAGAATGGTCCTTTAATATCAAAATGCCGAGATGAAGGTAGAGGGAAAGGTATTCGAGATTCATCAAATGAAGTGAACCATGAGGTTGCAACAAACCAAGAATCTTCTACCATTGAGATAGCCTCCTCAACGTCAGGAGAGGTAAAAATTACTATGAGCTGCAGTTCAGCACTTGGGAGATCAGATTTTCGTTTGCCTTGTCGAGATCGGCTTTTAAAAATGATGGAGGATAAATGTCTGCAATCATATAATATCACTGACCCAAATTTTTCTATCATGAAACTTTTGAGAGATATGTGTGACTGCGTGCTGGAATTCAGAACTGATTCAAATGATGACTCACAGGAAGGATCTGAAATGATGCCATCAAGTCTAAATGTGTTGAAGGAATCTAAGGCATGTGATGCTCTGATTATCAGAGGCAATACAGAAGATTTAGGATTGCATTCTGGCATGTCAAATGGATCAATCAACATTCAGTCTTCTTCTGCACTTGCTGCATCTTGCATTTCCCCTTCTTCCCCGCTTTTGAGTGGTACGAATGATGCTGTACTAGTCACCAAGAAGGTCAGAAGTGATTTTCCAGAGTGTGATGGTGGAAAGGGGCTGGAGGATCCTATATCACCACATTCAGGCAGTTTGGTGGTTATTCAACAGCATCAGCTTACTCCCGATGATCTAAGGTCTCTTCATGGTGCTGATGACCTTTCAAAAGGAGAAGAAAATCTAAGAATTCCATGGGTGAATGAAATAACGAATGATTTCCCTCCACCTTTTCACTATCTGCACCAAAGCGTTGGTTTCAAAGATGCCTATGTTAACTGGTGTCTTTCAAACATCAAATGTGAGGATTACTGTTCAACTTGTTTGGGCGATTGTCTTCTGTCCCCAACATCTTGTGTTTGTGCAAATAAAATTGGGGGTGGATATGCTTACACATCTGAAGGGCTACTGAATGAAAAATTCTTGGAAGAGTGTATTACCATTAGCCGCAATCCTCAACAACATCAGTCCTATTGTAAAATCTGCCCCCTTGAAAGAGCAAAGAACGATGATTGTTTAGAACCATGTAAAGGACACTTAAAGAGAAAGTTTATCAAAGAATGTTGGGTAAAATGTGGTTGTGTGAAACAGTGTGGCAATAGGGTTGTCCAACGAGGAATCACATTCAAATTGCAGGTGTTTTTTACTTCAGAAAGAAAAGGATGGGGTCTTCGTACCTTAGAGGAGCTTCCAAAAGGTGCATTTGTGTGTGAGTTTGTGGGAGAAATATTAACCATCAAAGAGTTGCATGAGAGGAACATGCAATGTGCCCAAAATGAAACGTACACATACCCAGTTCTATTAGATGCAGGTTGGGATTCAGGAGTTGTAAATGATAAAGAAGCTCTTTGCTTGGATTCAGCATCTTATGGGAATATTGCCAGGTTTATAAACCACAGATGTTTGGATGCAAATTTGATTGAGATCCCAGTTGAAGTTGAAACCTCAGACCATCGCTACTTTCATCTTGCCTTCTTCACATCCAGGAAAGTGGCTGCACTGGAAGAGCTAACTTGGGATTATGGCATTGACTTTGATGACAATGAGGGTCCTGTCAAGCCTTTCTCTTGCAGATGTGGCAGCAAATTCTGCAGGAAGATGAAGCGATCAAATAGATCCAATAGATCTGCGTCGATTGCATGA 2424 0.4175 MAPNPRVAAAYRAMTVLGIKEVKVKPVLKQLLKLYDKNWELIEQENYRVLADAIFEQEEKELQGKRTKNQNNDEGEMEDEEAQMQDEPVRPLKRLRLRGQENQASHPLSICGTSSAASPSKMPKVEDELPDSCSNRNAETGIRPVPVRDSSVDKGKQPLSPQTAPGGRRLRSEKASPSVSFKEPPAEQRIVPLQKNQLPYTLALIKPKDEPVDELVDYDAPSAAIHPELPGGRDPPMRHDATRKQDKNGPLISKCRDEGRGKGIRDSSNEVNHEVATNQESSTIEIASSTSGEVKITMSCSSALGRSDFRLPCRDRLLKMMEDKCLQSYNITDPNFSIMKLLRDMCDCVLEFRTDSNDDSQEGSEMMPSSLNVLKESKACDALIIRGNTEDLGLHSGMSNGSINIQSSSALAASCISPSSPLLSGTNDAVLVTKKVRSDFPECDGGKGLEDPISPHSGSLVVIQQHQLTPDDLRSLHGADDLSKGEENLRIPWVNEITNDFPPPFHYLHQSVGFKDAYVNWCLSNIKCEDYCSTCLGDCLLSPTSCVCANKIGGGYAYTSEGLLNEKFLEECITISRNPQQHQSYCKICPLERAKNDDCLEPCKGHLKRKFIKECWVKCGCVKQCGNRVVQRGITFKLQVFFTSERKGWGLRTLEELPKGAFVCEFVGEILTIKELHERNMQCAQNETYTYPVLLDAGWDSGVVNDKEALCLDSASYGNIARFINHRCLDANLIEIPVEVETSDHRYFHLAFFTSRKVAALEELTWDYGIDFDDNEGPVKPFSCRCGSKFCRKMKRSNRSNRSASIA 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2563 807 MobiDBLite consensus disorder prediction 223 279 - -
Prci1g2563 807 MobiDBLite consensus disorder prediction 232 269 - -
Prci1g2563 807 MobiDBLite consensus disorder prediction 100 192 - -
Prci1g2563 807 SUPERFAMILY SET domain 488 793 IPR046341 -
Prci1g2563 807 Gene3D - 1 60 IPR043017 -
Prci1g2563 807 Pfam Pre-SET motif 483 628 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci1g2563 807 SMART preset_2 479 620 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci1g2563 807 SMART set_7 636 775 IPR001214 GO:0005515
Prci1g2563 807 CDD SET_SETDB-like 503 769 - -
Prci1g2563 807 MobiDBLite consensus disorder prediction 102 120 - -
Prci1g2563 807 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 807 IPR025776 -
Prci1g2563 807 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 803 - -
Prci1g2563 807 ProSiteProfiles SET domain profile. 636 769 IPR001214 GO:0005515
Prci1g2563 807 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Prci1g2563 807 Pfam SET domain 648 769 IPR001214 GO:0005515
Prci1g2563 807 Gene3D SET domain 482 794 IPR046341 -
Prci1g2563 807 MobiDBLite consensus disorder prediction 61 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2563 Prci-Chr1 45364753 45370865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2563 612 794 C2H2 Transcription Factor Family AT2G23740 39.683 4.47e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci1g2563 Pre-SET 2.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2563 - - gmx:100787369 876.7