Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2528 ATGGATCATTTGGTTGGTGGGAAGTTTAAACTGGGAAGGAAAATTGGAAGTGGCTCTTTTGGGGAGCTTTATTTAGGAGTAAATGTGCAAAATGGAGAGGAGGTGGCCGTTAAGCTGGAACCTGTGAAGACCAGGCATCCTCAACTTTTCTATGAGTCAAAATTATATATGGTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAATGGTTTGGAGTCGAGGGAGACTATAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTGTTCAACTATTGCAATCGGAAATTCACATTGAAGACTGTGTTAATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCACTCAAGAGGTTTTCTTCACCGTGATTTAAAGCCAGACAATTTTCTTATGGGCCTAGGACGTAAAGCAAACCAGGTGTACATAATTGACTATGGCCTTGCAAAAAAGTATAGGGATCTTCAGACTCATAAGCACATACCATACAGGGAAAACAAGAACCTCACTGGCACAGCTCGCTATGCAAGTGTGAACACTCATCTCGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTTCTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTCAAGGCTGGCACAAAAAAACAAAAATATGATAAGATCAGTGAGAAGAAGGCATCAACCCCCATAGAGGTTCTCTGTAAATCATACCCATCTGAGTTTGTATCTTACTTCCACTACTGCCGGTCATTGCGTTTTGAGGACAAGCCAGATTATTCATATTTAAAGAGACTTTTTCGAGACTTATTTATTCGAGAAGGCTATCAGTTTGACTATGTTTTTGATTGGACTATATTAAAGTATCCACAGATTGGTTCTAGCTCTAGAGGACGGCATGCCAGTGGCAAAGCAGCTATGAATGCAGGAACATCCGTGCAAAAGCCAGAAAAGATGTCAGTTGGGAAAGATCCTAGAGAGAAATTTTCTGGCACTGTTGAAACGTTCTCCAGGAGAAACCCCACAAGTTCTAGTCCTCGAGATGATAAACAAAGGATTTTTGAGGATGTACAGCAACACAAGGATATGCACCGTGAACAAGAGAAGGTACACAGTTCTGCTCGATATGGAAGCAGTTCAAGAAAAGCCCTCATCTCATCTAACAAGCCAAGTTCGTCAGCTGACCACAGTGATACTCGTACTGGTCGGCTGACTACAAGCAGTAGCCGCCCTTCGACCACACGTGCTCTGTATGAAAGCAAACAACCAAGCTTTACACGCAACACTTCTTCTAGAGGCAATCGTGATGATCCTCTTAGGAGCTTTGAGCTTCTCTCTATCAGGAAGTAA 1368 0.4232 MDHLVGGKFKLGRKIGSGSFGELYLGVNVQNGEEVAVKLEPVKTRHPQLFYESKLYMVLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDLKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKASTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRGRHASGKAAMNAGTSVQKPEKMSVGKDPREKFSGTVETFSRRNPTSSSPRDDKQRIFEDVQQHKDMHREQEKVHSSARYGSSSRKALISSNKPSSSADHSDTRTGRLTTSSSRPSTTRALYESKQPSFTRNTSSRGNRDDPLRSFELLSIRK 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2528 455 CDD STKc_CK1_delta_epsilon 8 282 - -
Prci1g2528 455 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2528 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Prci1g2528 455 MobiDBLite consensus disorder prediction 379 438 - -
Prci1g2528 455 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Prci1g2528 455 MobiDBLite consensus disorder prediction 325 339 - -
Prci1g2528 455 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2528 455 MobiDBLite consensus disorder prediction 300 455 - -
Prci1g2528 455 MobiDBLite consensus disorder prediction 439 455 - -
Prci1g2528 455 MobiDBLite consensus disorder prediction 349 378 - -
Prci1g2528 455 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2528 455 FunFam Casein kinase 1-like protein 1 330 - -
Prci1g2528 455 Gene3D Transferase(Phosphotransferase) domain 1 1 345 - -
Prci1g2528 455 FunFam Putative Casein kinase I 1 85 - -
Prci1g2528 455 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Prci1g2528 455 PANTHER CASEIN KINASE-RELATED 13 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2528 Prci-Chr1 45171069 45179046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2528 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 1.71e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Prci1g2528 Pkinase 4.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2528 K08960 - qsa:O6P43_010486 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2528 1 45171069 45179046 Prci1g2528 1 45171069 45179046 ECH