Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2527 ATGATGAAAGTGGGATTCAAGGTTATTCATGGCGATTGTTTCAACATGATCAGACCACATGTGCATGAATCTTGGGACTATCCGAATAATAATGTTGGGCTATCCTCGTCAGCTGCAACATCATCATCATCATCAATATTAATCCCATTTTCAAAGCCACCAGCCATTGACACCACCACCAACAGTACTGTAAACTTGGCAACCAACGAGTTTTCAGATTGGGTGGAGCATATTACCAAACACCTTGTGGACGACTTACCCGCAGCTGAAACCACATCTGATCATAACTTGCTTCATCCTTATAACCACTGCCAAACAGGGTCTACTTCTCATGACAACCTCGTACCCACACCAGTAGTTTCACCTGTTCTATACCCTAGGAATAAGGGTCCCTTCAACAATGATGACCTGCAAATTCAAATTCAAACTCAAACGAACCCATCATCAGTAGATCACGATCAAAGCAATGATGTGTTACACCTCTTAACACTTCTAATGGAGTGTGCAGTGGCAATCTCAGTAGACAACCTCAGTGAGGCACACAGAATGTTGGTGGAGCTAACCCAACTGGCCTCACCGTACAAGCCATCCTGTGGAGAGCGTATTGTGGCGTATTTCGCTAAAGCCATGACTAGCAGAGTAATGAACTCGTGGCTCGGAGTATTTTCCCCTTTGATTGACCACAGAAGCATCCACTCTTCGCTCCAGGTGTTCAACAATATTTCGCCTTTCATCAAGTTCGCACATTTCACTTCCAATCAAGCCATTCTTGAAGCAGTGCATTGCTGTGATAGTATTCATATCATAGACTTAGACATCATGCAGGGTCTTCAATGGCCGGCTTTCTTCCACATCCTCGCCAACAGAATGGAGGGACGACCACGCCTTCGAATGACAGGCATGGGAGCTTCAATGGACATCCTCGTCGAGACAGGCAAGCAGCTCACGAACTTCGCAAAAAGGCTCGGAATGTCGTTTCATTTCCAACCAATCGCGAGGAAGTTCGGGGAAATCGAAGATGTCTCTAAGGTGCAAGTAAGACCCGGCGAGACAATCGCCGTCCACTGGCTGCAACACTCGCTGTACGACGCCACAGGACCAGACTGGAAAACTCTGAGACTTCTTGAAGAACTAGAGCCGAGAATCATAACTCTTGTGGAACAAGATGTTTCAAGCGGCGGGTCGTTTTTGGATCGTTTTGTCGGGTCTTTACACTATTATTCCACCGTGTTTGATTCTCTGGGAGCTTATATGGCCAGCGAGGACCTTAACAGGCACAAGGTTGAACACGGGCTTCTGTCCAGAGAGATAAATAACATATTGGCCATAGGAGGACCAGCAAGAAGTGGAGAAGACAAGTGCAGACAGTGGAGAAGTGAGCTTGCGAGGATTGGTTTTCTGCAGGTTCCAATGAGCCCTAACTCTATGGCTCAAGCTCAATTGATATTGAACATGTTCTCACCTCCTCATCATGTCCATGGCTATACTCTTGCTCAAGTCGATGGCACTCTCAGGCTTGGATGGAAGAACACTGGCCTGTATACAGCTTCCGCATGGACATGTTACAATTCCACTAATAATAAACACTAG 1590 0.4629 MMKVGFKVIHGDCFNMIRPHVHESWDYPNNNVGLSSSAATSSSSSILIPFSKPPAIDTTTNSTVNLATNEFSDWVEHITKHLVDDLPAAETTSDHNLLHPYNHCQTGSTSHDNLVPTPVVSPVLYPRNKGPFNNDDLQIQIQTQTNPSSVDHDQSNDVLHLLTLLMECAVAISVDNLSEAHRMLVELTQLASPYKPSCGERIVAYFAKAMTSRVMNSWLGVFSPLIDHRSIHSSLQVFNNISPFIKFAHFTSNQAILEAVHCCDSIHIIDLDIMQGLQWPAFFHILANRMEGRPRLRMTGMGASMDILVETGKQLTNFAKRLGMSFHFQPIARKFGEIEDVSKVQVRPGETIAVHWLQHSLYDATGPDWKTLRLLEELEPRIITLVEQDVSSGGSFLDRFVGSLHYYSTVFDSLGAYMASEDLNRHKVEHGLLSREINNILAIGGPARSGEDKCRQWRSELARIGFLQVPMSPNSMAQAQLILNMFSPPHHVHGYTLAQVDGTLRLGWKNTGLYTASAWTCYNSTNNKH 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2527 529 Pfam GRAS domain family 162 520 IPR005202 -
Prci1g2527 529 ProSiteProfiles GRAS family profile. 152 520 IPR005202 -
Prci1g2527 529 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 137 516 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2527 Prci-Chr1 45153723 45156101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2527 167 520 GRAS Transcription Factor Family AT3G54220 52.355 1.12e-129 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci1g2527 GRAS 1.4e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2527 - - pcin:129286457 1058.51