LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g2524	ATGCGGCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAATTGTTGACTATGATTGGAAAGGGTGCATTCGGAGAGGTTAGAATCTGCAGGGAAAAGACAACAGGCCATGTATTTGCGATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAGGATGATGACTACCTGTACCTGATTATGGAGTATCTACCTGGTGGGGATATGATGACTTTACTTATGAGAAAGGATATCTTGTCTGAAGATGAGGCTAGATTTTATGTTGGAGAAACAGTTTTGGCGATTGAATCTATACATAAACACAATTATATCCATAGGGATATTAAACCTGACAATTTGTTATTGGATAGATACGGACATTTAAGACTGTCAGATTTTGGTCTTTGTAAACCATTAGATTGCAGCATACTTCAAGAAGAAGACTTTTCCGTAGGTCAGTGTGTGAATGGTTCTACACAGAATGATGAACGTGGATCTTCAAATCGCACACAACAAGAACAATTGCAACACTGGCAAAAGAACAGGAGGACACTCGCTTATTCTACTGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCTCTTGGAGCTATTATGTATGAAATGTTGGTAGGATATCCTCCTTTTTATTCTGACGATCCAATGACAACATGCAGGAAGATAGTAAACTGGAAAACTCACTTGAAATTTCCTGAAGAAGCCATGCTATCTCCTGAAGCTAAAGATTTGATCAGTAAGCTATTGTGTAATGTGAATGAGAGGCTGGGATCAAAAGGCGCAGGTGAAATAAAGGCTCATTCATTTTTCGAAGGTATTGAATGGGATAAGCTATACCAAATGGAAGCTGCATTTATTCCTGAGGTTAATGATGACTTGGATACTCAAAATTTTGAGAAGTTTGATGAGTCCGACAACTGCAGTCAACCATCTTCAAGAAGTGGTCCATGGAGGAAGATGCTCTCATCTAAAGACATGAATTTTGTCGGATACACGTATAAGAACTTTGAAATTGTGAATGACTATCAAGTTGCTGGCATGGCTGAATTGAAAAAGAAAACCTCCAAAGTTAAGAGGCCGTCCATCAAGTCCCTTTTTGATGATGAGATCGCTGAAGCATCAGAAGCCTCTGAGCCTTCTGCAAGCAATGAACCAGGTTCAGACAGTTTTAGGAGCCATAAACTCAAGCCAGCTAACAGCATTTTGACTTGCTCCATTGATGCAACTTTTTTAAGCTATTTTGTGCTTGGACGTGTTCATGGCTACATTTCTAGTTATTTGGCAGGCAGATAG	1416	0.3983	MRLQRHKMGVDDFELLTMIGKGAFGEVRICREKTTGHVFAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDILSEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSILQEEDFSVGQCVNGSTQNDERGSSNRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWKTHLKFPEEAMLSPEAKDLISKLLCNVNERLGSKGAGEIKAHSFFEGIEWDKLYQMEAAFIPEVNDDLDTQNFEKFDESDNCSQPSSRSGPWRKMLSSKDMNFVGYTYKNFEIVNDYQVAGMAELKKKTSKVKRPSIKSLFDDEIAEASEASEPSASNEPGSDSFRSHKLKPANSILTCSIDATFLSYFVLGRVHGYISSYLAGR	471

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Prci1g2524	471	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	132	144	IPR008271	GO:0004672\|GO:0006468
Prci1g2524	471	MobiDBLite	consensus disorder prediction	177	196	-	-
Prci1g2524	471	PANTHER	SERINE/THREONINE-PROTEIN KINASE	9	368	-	-
Prci1g2524	471	Pfam	Protein kinase domain	14	311	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Prci1g2524	471	SUPERFAMILY	Protein kinase-like (PK-like)	5	365	IPR011009	-
Prci1g2524	471	MobiDBLite	consensus disorder prediction	414	433	-	-
Prci1g2524	471	CDD	STKc_NDR_like	11	375	-	-
Prci1g2524	471	Gene3D	Phosphorylase Kinase; domain 1	2	96	-	-
Prci1g2524	471	FunFam	Non-specific serine/threonine protein kinase	210	329	-	-
Prci1g2524	471	SMART	pkinase_C_6	312	376	IPR000961	GO:0004674\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g2524	Prci-Chr1	45139782	45149613	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g2524	1	421	AGC Kinase Gene Family	AT3G23310	79.009	0.0	719

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_NDR	Prci1g2524		Pkinase	1.2e-63	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g2524	K08790		-	gmx:100820558	761.14

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