Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2524 ATGCGGCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAATTGTTGACTATGATTGGAAAGGGTGCATTCGGAGAGGTTAGAATCTGCAGGGAAAAGACAACAGGCCATGTATTTGCGATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAGGATGATGACTACCTGTACCTGATTATGGAGTATCTACCTGGTGGGGATATGATGACTTTACTTATGAGAAAGGATATCTTGTCTGAAGATGAGGCTAGATTTTATGTTGGAGAAACAGTTTTGGCGATTGAATCTATACATAAACACAATTATATCCATAGGGATATTAAACCTGACAATTTGTTATTGGATAGATACGGACATTTAAGACTGTCAGATTTTGGTCTTTGTAAACCATTAGATTGCAGCATACTTCAAGAAGAAGACTTTTCCGTAGGTCAGTGTGTGAATGGTTCTACACAGAATGATGAACGTGGATCTTCAAATCGCACACAACAAGAACAATTGCAACACTGGCAAAAGAACAGGAGGACACTCGCTTATTCTACTGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCTCTTGGAGCTATTATGTATGAAATGTTGGTAGGATATCCTCCTTTTTATTCTGACGATCCAATGACAACATGCAGGAAGATAGTAAACTGGAAAACTCACTTGAAATTTCCTGAAGAAGCCATGCTATCTCCTGAAGCTAAAGATTTGATCAGTAAGCTATTGTGTAATGTGAATGAGAGGCTGGGATCAAAAGGCGCAGGTGAAATAAAGGCTCATTCATTTTTCGAAGGTATTGAATGGGATAAGCTATACCAAATGGAAGCTGCATTTATTCCTGAGGTTAATGATGACTTGGATACTCAAAATTTTGAGAAGTTTGATGAGTCCGACAACTGCAGTCAACCATCTTCAAGAAGTGGTCCATGGAGGAAGATGCTCTCATCTAAAGACATGAATTTTGTCGGATACACGTATAAGAACTTTGAAATTGTGAATGACTATCAAGTTGCTGGCATGGCTGAATTGAAAAAGAAAACCTCCAAAGTTAAGAGGCCGTCCATCAAGTCCCTTTTTGATGATGAGATCGCTGAAGCATCAGAAGCCTCTGAGCCTTCTGCAAGCAATGAACCAGGTTCAGACAGTTTTAGGAGCCATAAACTCAAGCCAGCTAACAGCATTTTGACTTGCTCCATTGATGCAACTTTTTTAAGCTATTTTGTGCTTGGACGTGTTCATGGCTACATTTCTAGTTATTTGGCAGGCAGATAG 1416 0.3983 MRLQRHKMGVDDFELLTMIGKGAFGEVRICREKTTGHVFAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDILSEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSILQEEDFSVGQCVNGSTQNDERGSSNRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWKTHLKFPEEAMLSPEAKDLISKLLCNVNERLGSKGAGEIKAHSFFEGIEWDKLYQMEAAFIPEVNDDLDTQNFEKFDESDNCSQPSSRSGPWRKMLSSKDMNFVGYTYKNFEIVNDYQVAGMAELKKKTSKVKRPSIKSLFDDEIAEASEASEPSASNEPGSDSFRSHKLKPANSILTCSIDATFLSYFVLGRVHGYISSYLAGR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2524 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Prci1g2524 471 MobiDBLite consensus disorder prediction 177 196 - -
Prci1g2524 471 PANTHER SERINE/THREONINE-PROTEIN KINASE 9 368 - -
Prci1g2524 471 Pfam Protein kinase domain 14 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2524 471 SUPERFAMILY Protein kinase-like (PK-like) 5 365 IPR011009 -
Prci1g2524 471 MobiDBLite consensus disorder prediction 414 433 - -
Prci1g2524 471 CDD STKc_NDR_like 11 375 - -
Prci1g2524 471 Gene3D Phosphorylase Kinase; domain 1 2 96 - -
Prci1g2524 471 FunFam Non-specific serine/threonine protein kinase 210 329 - -
Prci1g2524 471 SMART pkinase_C_6 312 376 IPR000961 GO:0004674|GO:0005524|GO:0006468
Prci1g2524 471 FunFam Non-specific serine/threonine protein kinase 97 164 - -
Prci1g2524 471 Gene3D Transferase(Phosphotransferase) domain 1 97 174 - -
Prci1g2524 471 SMART serkin_6 13 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2524 471 ProSiteProfiles AGC-kinase C-terminal domain profile. 312 384 IPR000961 GO:0004674|GO:0005524|GO:0006468
Prci1g2524 471 Pfam Protein kinase C terminal domain 330 374 IPR017892 GO:0004674|GO:0005524|GO:0006468
Prci1g2524 471 FunFam Non-specific serine/threonine protein kinase 1 96 - -
Prci1g2524 471 ProSiteProfiles Protein kinase domain profile. 13 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2524 471 Gene3D Phosphorylase Kinase; domain 1 330 343 - -
Prci1g2524 471 Gene3D Transferase(Phosphotransferase) domain 1 208 329 - -
Prci1g2524 471 MobiDBLite consensus disorder prediction 417 433 - -
Prci1g2524 471 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2524 Prci-Chr1 45139782 45149613 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2524 1 421 AGC Kinase Gene Family AT3G23310 79.009 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Prci1g2524 Pkinase 1.2e-63 CL0016