Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2521 ATGGATTCTGCCAGGGGTTGGTTTCACAAGTTTCATCCAAGGGATAAAATGAGGTCTTCTTCGAAGAAGAAAGAGGGTTCTGGGGGAATCGAAGATTCAGATTCACAGCTGGATGAAGAAGCTCTTTCCAATGTAACGAAACAGAAAGTTGCGGCGGCAAAGCAGTATATAGAGAACCATTATAAGGAGCAAATGAAGAGCCTTCAGGAAAGAAAGGAGCGTCGAACTATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGACCAAAACAACCTTTTCAAGTTTTTGGAGAAAAAGGAAACTGAATACATGCGGCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAATTGTTGACTATGATTGGAAAGGGTGCATTCGGAGAGGTTAGAATCTGCAGGGAAAAGACAACAGGCCATGTATTTGCGATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAGGATGATGACTACCTGTACCTGATTATGGAGTATCTACCTGGTGGGGATATGATGACTTTACTTATGAGAAAGGATATCTTGTCTGAAGATGAGGCTAGATTTTATGTTGGAGAAACAGTTTTGGCGATTGAATCTATACATAAACACAATTATATCCATAGGGATATTAAACCTGACAATTTGTTATTGGATAGATACGGACATTTAAGACTGTCAGATTTTGGTCTTTGTAAACCATTAGATTGCAGCATACTTCAAGAAGAAGACTTTTCCGTAGGTCAGTGTGTGAATGGTTCTACACAGAATGATGAACGTGGATCTTCAAATCGCACACAACAAGAACAATTGCAACACTGGCAAAAGAACAGGAGGACACTCGCTTATTCTACTGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCTCTTGGAGCTATTATGTATGAAATGTTGGTAGGATATCCTCCTTTTTATTCTGACGATCCAATGACAACATGCAGGAAGATAGTAAACTGGAAAACTCACTTGAAATTTCCTGAAGAAGCCATGCTATCTCCTGAAGCTAAAGATTTGATCAGTAAGCTATTGTGTAATGTGAATGAGAGGCTGGGATCAAAAGGCGCAGGTGAAATAAAGGCTCATTCATTTTTCGAAGGTATTGAATGGGATAAGCTATACCAAATGGAAGCTGCATTTATTCCTGAGGTTAATGATGACTTGGATACTCAAAATTTTGAGAAGTTTGATGAGTCCGACAACTGCAGTCAACCATCTTCAAGAAGTGGTCCATGGAGGAAGATGCTCTCATCTAAAGACATGAATTTTGTCGGATACACGTATAAGAACTTTGAAATTGTGAATGACTATCAAGTTGCTGGCATGGCTGAATTGAAAAAGAAAACCTCCAAAGTTAAGAGGCCGTCCATCAAGTCCCTTTTTGATGATGAGATCGCTGAAGCATCAGAAGCCTCTGAGCCTTCTGCAAGCAATGAACCAGGTTCAGTTATTTGGCAGGCAGATAGAAAGCGCTACTTGCACTACTAA 1644 0.4033 MDSARGWFHKFHPRDKMRSSSKKKEGSGGIEDSDSQLDEEALSNVTKQKVAAAKQYIENHYKEQMKSLQERKERRTILEKKLADADVSEEDQNNLFKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRICREKTTGHVFAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDILSEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSILQEEDFSVGQCVNGSTQNDERGSSNRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWKTHLKFPEEAMLSPEAKDLISKLLCNVNERLGSKGAGEIKAHSFFEGIEWDKLYQMEAAFIPEVNDDLDTQNFEKFDESDNCSQPSSRSGPWRKMLSSKDMNFVGYTYKNFEIVNDYQVAGMAELKKKTSKVKRPSIKSLFDDEIAEASEASEPSASNEPGSVIWQADRKRYLHY 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2521 547 FunFam Non-specific serine/threonine protein kinase 316 435 - -
Prci1g2521 547 SUPERFAMILY Protein kinase-like (PK-like) 92 471 IPR011009 -
Prci1g2521 547 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 467 - -
Prci1g2521 547 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Prci1g2521 547 Gene3D Transferase(Phosphotransferase) domain 1 203 280 - -
Prci1g2521 547 Pfam Protein kinase domain 120 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2521 547 MobiDBLite consensus disorder prediction 1 31 - -
Prci1g2521 547 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Prci1g2521 547 Gene3D Phosphorylase Kinase; domain 1 90 202 - -
Prci1g2521 547 CDD STKc_NDR_like 117 481 - -
Prci1g2521 547 SMART serkin_6 119 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2521 547 MobiDBLite consensus disorder prediction 283 303 - -
Prci1g2521 547 Gene3D Transferase(Phosphotransferase) domain 1 314 435 - -
Prci1g2521 547 ProSiteProfiles AGC-kinase C-terminal domain profile. 418 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Prci1g2521 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Prci1g2521 547 CDD MobB_NDR_LATS-like 53 114 - -
Prci1g2521 547 MobiDBLite consensus disorder prediction 1 42 - -
Prci1g2521 547 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Prci1g2521 547 Gene3D Phosphorylase Kinase; domain 1 436 449 - -
Prci1g2521 547 SMART pkinase_C_6 418 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Prci1g2521 547 ProSiteProfiles Protein kinase domain profile. 119 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2521 547 Pfam Protein kinase C terminal domain 436 480 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2521 Prci-Chr1 45139081 45149613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2521 1 513 AGC Kinase Gene Family AT2G20470 79.198 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Prci1g2521 Pkinase 1.8e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2521 K08790 - gmx:100820558 920.613