Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2491 ATGATTTTTTGTTTGGTCTTTGTTGCAGTAATTATGGAATCAAAAAATAGAAGGAAATCTGTGAAATCTAAAAGTAAAGAAATCCCTTCAGCCCCCCCTGGTTTTAGATCCCTTACTTCTTTCATGCTAAAAAAGGTTGCAAAGACTGATAAATCTGAATGTGATCCAATCTGCATGGAGAGTATATTGAAGCTAAATGATGCTGCTGCATATAGGGCAATTCTTAAGCATCGTCCATGGATACTTTTCGATCATAGCAACTGTGACCCTGAGAAATCCAACACAGAGGATTTCCCTCAGGGTTTTTCTTCAAACGCTTGTCGTCCAAAAGGGGTTTCTCTTGGTTGTCCAGATTGTAATGATTGTCTGAAGGTAACTGCAAGGTGGTGCCCTGAGGATGCAAGAAGAGATGTCCTTGATGAAGTTCAAATGTTCCACCCAACAGAAGAGGAATTTAAAGACACACTTGAATATATTGCAAGCATACGTTCCAAAGCAGAGCCTTACGGAATCTGTCGTATTGTTCCTCCTCCTTCTTGGCAACCACCATGTCTTCCTGATGAAAAAAACATATGGGAAAACTCTAAATTTTCTACTAAGATTCAGCGGATTGATGGCCTCCAAGTTCAGTGCCAGCAAGAAGTTATTGACAACCCTTACAAAAATGTAGAGACCAAGACCAGAAAAGAGCCGGGAGCAGCTTTGGACTCTCAACCTGGTAATGAAAACCCCCATGATGTTAAAGACTTAGAGTCTAAACCTGGCCCTACCTTCAGTCTCAGTACATTTAAGAAATTTGCTGATGATTTCAAGGCCAAGTACTTCCACCGTGACAATAATGTCATGGGTTCTGATGAAAAGTGGGAGCCATCTGTGGAAAATGTTGAGGGAGAGTATGGACGAATTACTCAAAATCCAACTGATGAAATTGAGGTGGTTTTTGGTAATGACTTGGGGACTGGAGTTTTAAGCAGTGGATTTCCAATGGTGTCTGATTCTGTGGAGTCGTTAAATCATCCTGAATGTATGAGATCTGGATGGAATTTAAATAATATGCTTACACAAGCTGGTTCTCTCCTTTCATTTGAAAGCTCCGAGGTTTCTAGCAAATTTGCCCCTCAGGTTCACGTTGGAATGTGCTTTTCTTCATTCAATTGGAAAGTGGAAGAGCACCAGTTGTACTCGTTGTGTTACATGCATGTGGGAGAGCCTAGAGTTTGGTATAGCATTCCGGGAAGATTTGCTGCTGACTTTGAAACAGTGAGGAAGAAGCATCTCCCAATTTTGTTTGCAGAAGAGTCTGATTTGCTTGACAATTTGATGCAGTTATCCTCCGCCATATTGAAGTCAGAGGGTGTACCAGTATATCGCTGTGTCCAGTATCCCCGGGAGTTTGTTCTTGTCTTCCCAGGAGCATACCATTCCGGATTTGATTGTGGTTTCAATTTTTCTGAATCAGTCAGTTTTGCTCCTCTTGATTGGCTGCTTCATGGACAGAAAGTTGTAGAGTTATATTGTGAACAAAGGCGAAGGACATCAATTTCATACGATAAGCTGTTGCTTGGGGCAGCAAGGAAAGCTGTTAGGGCACAATTTGAGATTGGACTCTGCGGGATGGGTACCCCAGATAATTTATACTGGAAAGATGCATGTGGAAGGGATGGGATATTAACAAAAGCTTTTGATTTACGGAGAAAGAGTGAAAGTTCAAAGAGGGAATTTCTTTGCGCTTCTCTGAAGTCACGGATAATGGAAAAAGATTTCGATGTCACTTGCAAAAGAGAATGTTGTGTATGTCTCCGTGACTTGCACTTATCTGCCATAAGTTGTCCATGTTCGACCAACAAATTTGCATGTCTTAATCATGGAAAGCAGCTGTGTTTTTGCCCTTGGAGTGACAAATTTATCCTCTGGCGATATGAAATCAGTGAGTTGAATACCCTTTGTCTTGCTTTGGAGGGAAAAGCAAGTGTTATCCACAAATGGGCTAAAGTCGATCTTGGATTAACTGTGCACTCTGTCGCCTCCAAAGCATCGAAACAGAACCCAGGAAATGCAAGTGCTTCATCGTCTACTGCCTTAGCAAGAGTGGCATTTTTGAATTCACTGAAACGGAAAAGAGATGCAGTCGAGCCCAAAGGTTCGGGCACTGATGGTATCTCTCCTAGCATTGAGGCAAAATTGAAGCCACCGTTACCTGACTCAACATGTGTAGGTAAATCGAAGGCAAAACAGAAAAAGGTGGGTCACCAATCTACAGCAAGACACAAGAGTGGAGTCAATTCTGCTCCTGCCATTAAACCTGATCTCAAGTCGCGCAAGGTTCAGTCATCAATTCCAAACTTGGCTGAAAATGACCCAAAAGTGTCTAGGGATTTTCTAGGTCTTAGTTTAACGTCAGGTTATGTGTCACTTCTTCCGGAAATCAGGTCATTTGATGTTTCTTCAGATAGTTCAGCTTCATCATCAGGATCCGATGATGACACTTGA 2490 0.4193 MIFCLVFVAVIMESKNRRKSVKSKSKEIPSAPPGFRSLTSFMLKKVAKTDKSECDPICMESILKLNDAAAYRAILKHRPWILFDHSNCDPEKSNTEDFPQGFSSNACRPKGVSLGCPDCNDCLKVTARWCPEDARRDVLDEVQMFHPTEEEFKDTLEYIASIRSKAEPYGICRIVPPPSWQPPCLPDEKNIWENSKFSTKIQRIDGLQVQCQQEVIDNPYKNVETKTRKEPGAALDSQPGNENPHDVKDLESKPGPTFSLSTFKKFADDFKAKYFHRDNNVMGSDEKWEPSVENVEGEYGRITQNPTDEIEVVFGNDLGTGVLSSGFPMVSDSVESLNHPECMRSGWNLNNMLTQAGSLLSFESSEVSSKFAPQVHVGMCFSSFNWKVEEHQLYSLCYMHVGEPRVWYSIPGRFAADFETVRKKHLPILFAEESDLLDNLMQLSSAILKSEGVPVYRCVQYPREFVLVFPGAYHSGFDCGFNFSESVSFAPLDWLLHGQKVVELYCEQRRRTSISYDKLLLGAARKAVRAQFEIGLCGMGTPDNLYWKDACGRDGILTKAFDLRRKSESSKREFLCASLKSRIMEKDFDVTCKRECCVCLRDLHLSAISCPCSTNKFACLNHGKQLCFCPWSDKFILWRYEISELNTLCLALEGKASVIHKWAKVDLGLTVHSVASKASKQNPGNASASSSTALARVAFLNSLKRKRDAVEPKGSGTDGISPSIEAKLKPPLPDSTCVGKSKAKQKKVGHQSTARHKSGVNSAPAIKPDLKSRKVQSSIPNLAENDPKVSRDFLGLSLTSGYVSLLPEIRSFDVSSDSSASSSGSDDDT 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2491 829 Gene3D Cupin 127 490 - -
Prci1g2491 829 PANTHER LYSINE-SPECIFIC DEMETHYLASE 137 748 - -
Prci1g2491 829 SMART cupin_9 344 506 IPR003347 -
Prci1g2491 829 SUPERFAMILY Clavaminate synthase-like 306 528 - -
Prci1g2491 829 ProSiteProfiles JmjN domain profile. 142 183 IPR003349 -
Prci1g2491 829 MobiDBLite consensus disorder prediction 221 254 - -
Prci1g2491 829 Pfam JmjC domain, hydroxylase 374 489 IPR003347 -
Prci1g2491 829 ProSiteProfiles JmjC domain profile. 341 506 IPR003347 -
Prci1g2491 829 Pfam jmjN domain 145 176 IPR003349 -
Prci1g2491 829 SMART JmjN_1 141 182 IPR003349 -
Prci1g2491 829 MobiDBLite consensus disorder prediction 708 787 - -
Prci1g2491 829 Pfam C5HC2 zinc finger 596 648 IPR004198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2491 Prci-Chr1 45042841 45049498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2491 12 676 JUMONJI Transcription Factor Family AT1G08620 47.210 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Prci1g2491 JmjC 1.2e-31 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2491 K11446 - pcin:129315581 1640.17