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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Prci1g2488
ATGTTCCACCCAACAGAAGAGGAATTTAAAGACACACTTGAATATATTGCAAGCATACGTTCCAAAGCAGAGCCTTACGGAATCTGTCGTATTGTTCCTCCTCCTTCTTGGCAACCACCATGTCTTCCTGATGAAAAAAACATATGGGAAAACTCTAAATTTTCTACTAAGATTCAGCGGATTGATGGCCTCCAAGTTCAGTGCCAGCAAGAAGTTATTGACAACCCTTACAAAAATGTAGAGACCAAGACCAGAAAAGAGCCGGGAGCAGCTTTGGACTCTCAACCTGGTAATGAAAACCCCCATGATGTTAAAGACTTAGAGTCTAAACCTGGCCCTACCTTCAGTCTCAGTACATTTAAGAAATTTGCTGATGATTTCAAGGCCAAGTACTTCCACCGTGACAATAATGTCATGGGTTCTGATGAAAAGTGGGAGCCATCTGTGGAAAATGTTGAGGGAGAGTATGGACGAATTACTCAAAATCCAACTGATGAAATTGAGGTGGTTTTTGGTAATGACTTGGGGACTGGAGTTTTAAGCAGTGGATTTCCAATGGTGTCTGATTCTGTGGAGTCGTTAAATCATCCTGAATGTATGAGATCTGGATGGAATTTAAATAATATGCTTACACAAGCTGGTTCTCTCCTTTCATTTGAAAGCTCCGAGGTTTCTAGCAAATTTGCCCCTCAGGTTCACGTTGGAATGTGCTTTTCTTCATTCAATTGGAAAGTGGAAGAGCACCAGTTGTACTCGTTGTGTTACATGCATGTGGGAGAGCCTAGAGTTTGGTATAGCATTCCGGGAAGATTTGCTGCTGACTTTGAAACAGTGAGGAAGAAGCATCTCCCAATTTTGTTTGCAGAAGAGTCTGATTTGCTTGACAATTTGCAGATGCAGTTATCCTCCGCCATATTGAAGTCAGAGGGTGTACCAGTATATCGCTGTGTCCAGTATCCCCGGGAGTTTGTTCTTGTCTTCCCAGGAGCATACCATTCCGGATTTGATTGTGGTTTCAATTTTTCTGAATCAGTCAGTTTTGCTCCTCTTGATTGGCTGCTTCATGGACAGAAAGTTGTAGAGTTATATTGTGAACAAAGGCGAAGGACATCAATTTCATACGATAAGCTGTTGCTTGGGGCAGCAAGGAAAGCTGTTAGGGCACAATTTGAGATTGGACTCTGCGGGATGGGTACCCCAGATAATTTATACTGGAAAGATGCATGTGGAAGGGATGGGATATTAACAAAAGCTTTTGATTTACGGAGAAAGAGTGAAAGTTCAAAGAGGGAATTTCTTTGCGCTTCTCTGAAGTCACGGATAATGGAAAAAGATTTCGATGTCACTTGCAAAAGAGAATGTTGTGTATGTCTCCGTGACTTGCACTTATCTGCCATAAGTTGTCCATGTTCGACCAACAAATTTGCATGTCTTAATCATGGAAAGCAGCTGTGTTTTTGCCCTTGGAGTGACAAATTTATCCTCTGGCGATATGAAATCAGTGAGTTGAATACCCTTTGTCTTGCTTTGGAGGGAAAAGCAAGTGTTATCCACAAATGGGCTAAAGTCGATCTTGGATTAACTGTGCACTCTGTCGCCTCCAAAGCATCGAAACAGAACCCAGGAAATGCAAGTGCTTCATCGTCTACTGCCTTAGCAAGAGTGGCATTTTTGAATTCACTGAAACGGAAAAGAGATGCAGTCGAGCCCAAAGGTTCGGGCACTGATGGTATCTCTCCTAGCATTGAGGCAAAATTGAAGCCACCGTTACCTGACTCAACATGTGTAGGTAAATCGAAGGCAAAACAGAAAAAGGTGGGTCACCAATCTACAGCAAGACACAAGAGTGGAGTCAATTCTGCTCCTGCCATTAAACCTGATCTCAAGTCGCGCAAGGTTCAGTCATCAATTCCAAACTTGGCTGAAAATGACCCAAAAGTGTCTAGGGATTTTCTAGGTCTTAGTTTAACGTCAGGTTATGTGTCACTTCTTCCGGAAATCAGGTCATTTGATGTTTCTTCAGATAGTTCAGCTTCATCATCAGGATCCGATGATGACACTTGA
2064
0.4244
MFHPTEEEFKDTLEYIASIRSKAEPYGICRIVPPPSWQPPCLPDEKNIWENSKFSTKIQRIDGLQVQCQQEVIDNPYKNVETKTRKEPGAALDSQPGNENPHDVKDLESKPGPTFSLSTFKKFADDFKAKYFHRDNNVMGSDEKWEPSVENVEGEYGRITQNPTDEIEVVFGNDLGTGVLSSGFPMVSDSVESLNHPECMRSGWNLNNMLTQAGSLLSFESSEVSSKFAPQVHVGMCFSSFNWKVEEHQLYSLCYMHVGEPRVWYSIPGRFAADFETVRKKHLPILFAEESDLLDNLQMQLSSAILKSEGVPVYRCVQYPREFVLVFPGAYHSGFDCGFNFSESVSFAPLDWLLHGQKVVELYCEQRRRTSISYDKLLLGAARKAVRAQFEIGLCGMGTPDNLYWKDACGRDGILTKAFDLRRKSESSKREFLCASLKSRIMEKDFDVTCKRECCVCLRDLHLSAISCPCSTNKFACLNHGKQLCFCPWSDKFILWRYEISELNTLCLALEGKASVIHKWAKVDLGLTVHSVASKASKQNPGNASASSSTALARVAFLNSLKRKRDAVEPKGSGTDGISPSIEAKLKPPLPDSTCVGKSKAKQKKVGHQSTARHKSGVNSAPAIKPDLKSRKVQSSIPNLAENDPKVSRDFLGLSLTSGYVSLLPEIRSFDVSSDSSASSSGSDDDT
687
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Prci1g2488
687
ProSiteProfiles
JmjN domain profile.
1
40
IPR003349
-
Prci1g2488
687
PANTHER
LYSINE-SPECIFIC DEMETHYLASE
2
606
-
-
Prci1g2488
687
Pfam
JmjC domain, hydroxylase
231
347
IPR003347
-
Prci1g2488
687
Pfam
jmjN domain
2
33
IPR003349
-
Prci1g2488
687
MobiDBLite
consensus disorder prediction
566
645
-
-
Prci1g2488
687
SMART
JmjN_1
1
39
IPR003349
-
Prci1g2488
687
SUPERFAMILY
Clavaminate synthase-like
162
386
-
-
Prci1g2488
687
Gene3D
Cupin
1
348
-
-
Prci1g2488
687
MobiDBLite
consensus disorder prediction
77
111
-
-
Prci1g2488
687
SMART
cupin_9
201
364
IPR003347
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Prci1g2488
Prci-Chr1
45042841
45049498
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Prci1g2488
1
534
JUMONJI Transcription Factor Family
AT1G08620
50.364
6.38e-172
522
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
Jumonji
Prci1g2488
JmjC
6.8e-33
CL0029
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Prci1g2488
K11446
-
pcin:129315581
1361.67
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