Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2458 ATGGAAGGGAAGAGATACAGAGGGATAAGGAAGAGGCCGTGGGGGAAGTATGCGGCGGAGATCAGAGATCCTTCCAGGAACGGCATGCGCATTTGGCTCGGAACCTTCCACACCGCTGAGCAGGCCGCCAGGGCTTACGACGCCGCCGCTTTCAGATTCAGGGGTCACCGAGCCATCCTCAACTTCCCTAACCATTATACCCACCTTTTTCCTCCTCCTCCTCCTCCTCATACTACCATGATCTCTTTCTCTTCTTCTTGTGCAGTTGCAGCTTCTTCATCTTCACATAATTCAGCCGCCGCCGACAGAGAGAGCTCACAGAGCCAAGAACAGCAACAGGATGATCCGGTTGAGTTGGAGTGCTTGGATGACAAGGTGTTGGACGATCTTCTTCTTCAACCACAGCTTCCTCATCATCCCCACTCTCCTTCCACTGCTCAGCCTCCTTAG 450 0.5356 MEGKRYRGIRKRPWGKYAAEIRDPSRNGMRIWLGTFHTAEQAARAYDAAAFRFRGHRAILNFPNHYTHLFPPPPPPHTTMISFSSSCAVAASSSSHNSAAADRESSQSQEQQQDDPVELECLDDKVLDDLLLQPQLPHHPHSPSTAQPP 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2458 149 MobiDBLite consensus disorder prediction 130 149 - -
Prci1g2458 149 Pfam AP2 domain 5 56 IPR001471 GO:0003700|GO:0006355
Prci1g2458 149 ProSiteProfiles AP2/ERF domain profile. 5 63 IPR001471 GO:0003700|GO:0006355
Prci1g2458 149 SMART rav1_2 5 69 IPR001471 GO:0003700|GO:0006355
Prci1g2458 149 PRINTS Ethylene responsive element binding protein signature 6 17 IPR001471 GO:0003700|GO:0006355
Prci1g2458 149 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Prci1g2458 149 PANTHER DNA-BINDING DOMAIN 5 130 IPR044808 GO:0003700|GO:0009873
Prci1g2458 149 MobiDBLite consensus disorder prediction 92 115 - -
Prci1g2458 149 Gene3D AP2/ERF domain 4 64 IPR036955 GO:0003700|GO:0006355
Prci1g2458 149 MobiDBLite consensus disorder prediction 92 120 - -
Prci1g2458 149 FunFam Ethylene-responsive transcription factor 2 4 64 - -
Prci1g2458 149 SUPERFAMILY DNA-binding domain 5 64 IPR016177 GO:0003677
Prci1g2458 149 CDD AP2 4 65 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2458 Prci-Chr1 44725230 44726608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2458 5 131 AP2-EREBP Transcription Factor Family AT3G23230 55.118 4.36e-37 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci1g2458 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2458 - - gmx:100778998 114.775