Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2457 ATGGAACAGTCGCCAAAGAAAAAGGAGAAGGAAGATGGACCGAGAGAGACCAAGTACAGAGGAGTACGGAGGCGACCATGGGGGAAGTTCGCAGCAGAGATTCGAGATTCGAACAGGCACGGAGCTCGAATATGGCTGGGCACTTTCAGCACAGCAGAAGAAGCGGCGAGAGCCTATGATCGTGCGGCTTTTGGGATGAGAGGGCAATCGGCGATTCTGAACTTCCCGGAAGAATATGGTTTGAGCAATGGGGGAAGTGCTGGTGCTAGTAGTAGTAGCCACCAGCATCGCTGTTCATCGTCGTCTTCAATGGTGGAAGCCCAGGGTCAGGGTGGGAGACAAGTGTTTGAGTTCGAGTGTTTGGATGATAAATTGTTAGAGGACCTTCTCGATCATGCCGCCAAGAAAGAAGAGTAA 417 0.5156 MEQSPKKKEKEDGPRETKYRGVRRRPWGKFAAEIRDSNRHGARIWLGTFSTAEEAARAYDRAAFGMRGQSAILNFPEEYGLSNGGSAGASSSSHQHRCSSSSSMVEAQGQGGRQVFEFECLDDKLLEDLLDHAAKKEE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2457 138 MobiDBLite consensus disorder prediction 82 106 - -
Prci1g2457 138 FunFam Ethylene-responsive transcription factor 2 17 77 - -
Prci1g2457 138 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Prci1g2457 138 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Prci1g2457 138 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Prci1g2457 138 PANTHER DNA-BINDING DOMAIN 6 130 IPR044808 GO:0003700|GO:0009873
Prci1g2457 138 MobiDBLite consensus disorder prediction 1 22 - -
Prci1g2457 138 MobiDBLite consensus disorder prediction 84 106 - -
Prci1g2457 138 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Prci1g2457 138 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Prci1g2457 138 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Prci1g2457 138 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Prci1g2457 138 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2457 Prci-Chr1 44721779 44722901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2457 15 136 AP2-EREBP Transcription Factor Family AT3G23230 58.537 1.23e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci1g2457 AP2 6.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2457 - - qsu:111996183 134.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2457 1 44721779 44722901 Prci1g2457 1 44721779 44722901 ECH