Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2442 ATGTCTCACAGAGAGAAGGCATTTTGGGTGATCTATAAAAAATACAGGCCTCACCTTCTCATGGTTCTGGTTGAGGTGGCTGTCACACTTCTCTATTTCCTGATAGAGGCTTCTTTCAACAAGGTGATGAACCTTCAAGTCTTCGTAACCTACCGGCATGCTCTTGGTGGTATTATAGTGCTTCCTTTCGCATATGTTCTTGAGAGAAAAGCTAGGCCAAAGCTGACGATGGCAATGTTCATGGAGCTATTTTTGCTTTCCCTTTTGGGGTTCAGCCTCACCCTAAACATGTATTTTGCAAGTTTGAAGTGCACCTCTCCTTCATTTGTCACATCAATGGTTAACACAATATCAGCTCTAACATTTATAATTGCAGTTGCACTCAGATTAGAGGCTGTTGATGTTAAGAACCCTCGTGGAGTAGCTAAGATCCTTGGAACTCTTCTGTCATTGGCTGGAGCTTTGACTATGACTTTGTACAAAGGACATGCTATTCCGAACTTGAAGGGTGCTCCAATCCTAATCAGAGGCCAATCTGGTCATACTAATTGGATTAAAGGATCAATTCTGACTGTTGCAAGTTGCATATCATGGTCAGTATTCTACTTAATGCAGTCTATAACAGTGAAGAAATATCCAGCTAAGCTTTCGCTCACGGCATGGATAAATTGTATCGGTGCAGTACAATCAGCAGCTTTTACTTTGATCGTTGAACATAAACTCAATGTCTGGTTCATTACATCCAGTATTGAACTCTGGTGCGTCTTATATGCTGGAGTAATAAGTTGTAGTTTGTGCATTTTCATTCAGTTCTGGACAACGGACCAAAAGGGACCTGTCTTCGTGAGCATGTTCAATCCTCTTGGGACAGTCTTGGTGTCAATCCTAGCGTATTTTGTCATGGGGGAACAGCTTCACTTGGGCAGTATACTTGGAGGAGTCATAGTTGTGATCGGACTATACTTGCTTTTGTGGGGAAAAGAAAGTGATCAAGATTACAAATCACGGCAACTATCAAGTTTCAACATATAA 1032 0.4147 MSHREKAFWVIYKKYRPHLLMVLVEVAVTLLYFLIEASFNKVMNLQVFVTYRHALGGIIVLPFAYVLERKARPKLTMAMFMELFLLSLLGFSLTLNMYFASLKCTSPSFVTSMVNTISALTFIIAVALRLEAVDVKNPRGVAKILGTLLSLAGALTMTLYKGHAIPNLKGAPILIRGQSGHTNWIKGSILTVASCISWSVFYLMQSITVKKYPAKLSLTAWINCIGAVQSAAFTLIVEHKLNVWFITSSIELWCVLYAGVISCSLCIFIQFWTTDQKGPVFVSMFNPLGTVLVSILAYFVMGEQLHLGSILGGVIVVIGLYLLLWGKESDQDYKSRQLSSFNI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2442 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 162 - -
Prci1g2442 343 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Prci1g2442 343 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020
Prci1g2442 343 PANTHER WAT1-RELATED PROTEIN 17 331 IPR030184 GO:0016020|GO:0022857
Prci1g2442 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2442 Prci-Chr1 44664780 44667377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2442 13 331 Nodulin-like Gene Family AT4G08300 35.583 2.49e-75 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2442 - - gmx:100808275 455.677