Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2441 ATGGGTACCAACTTGCAGCAAGTACTCAGGAGCCTCTGTTTGAATTCTGAGTGGAAGTACGCCATCTTTTGGAAACTTAAACATCATGCTCGCATGATCTTGACTTGGGAGGATGGTTACTATGACAATCCTGATGAACATGACTCCTTAGAGAATAAGCCCAGCCAGCAGGCCTCAGAACGGGTTGAGGGTGGTCATTTCTCGCATGACCCTCTGGGGTTAGCTGTGGCAAAGATGTCATATCGTGTATATACTTTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCGGTGGATCTTTTCTGGTAATCAAGTTGCAGGTTCTGGCTCATCATATGAATTTGTTGATGACTGGCAACCCCAGTTTTCTGTTGGAATCAAGACCATTGCTGTTGTAGCTGTGGTCCCACTTGGAGTTGTTCAGCTTGGCTCATTAAATAATGTGATAGAAGATGCGGATATTGTAACTCACATCAGAAATCTTTTTCTGCCTACTCAGCATTACACAATAGGCCATACACTTAACCAAATACAATGTAGTGCAAAGAATTTCTCGCCTCTGGAAATGGCTGTTGATATGGCCAAGCATGGGGGTTCTGAATTTAACTTTGATGAAAGTGACATCTTACTTCAGTCAATGTCAAATATGATGGATCTGGAGAATCAGAAATTTTTAGAGATCAGATCTCTAAATGAGAGAGGTTATGCAGTGGGCACTAGTGGCTGCAAACACGTGAGGGTGGAATCAGAAAAAAATATGCCATCATTGTCACAGAATTCTGTTTCAAATATTAATAGCTTCGAAGATTTAATATCTCCACCAGAGAAGGTTGGATCTCATTCTGCTGGCATCCCTGCAGGCTTTGTTGATGCTATTGTTCATGGAAGTGATAAGCTACCTTATGTGGAGCCTAACCAACAAGGCGTCTCCAGTGTCTCTAGACCTTCAGATGCAGACTTCCAAAAGGGCAGATTAAAGTCAGAATTTCAGACTAGTCCTTGTTACAAGGATGTCCCATTCACAATGTTGAAGTTCCCTGCTGGCTGGGAGCTGCATGAAGCACTTGGACCAGCTTTTTTGAGACGTAATGAATGCTGTGATTGGGATGCATGGGTGAATCAAGATATTAAAACTGCAGAGATGCCAGATGAGATTAGCTGTAGCCAGTTGACTTCTGAGTCTCGTCAAGAACATCTTTTGGAGGCAGTTGTAGCCAATGTTCACCACAGTAATAATGACGCAAATAGTGACTTATCATTTTGTTCATCAGTGCAGTCTGGCGTAGCATCTGGAACAAATCCTGAAGCTGCTACTCATACCATGCGCACTATTAATTCAGAATGTTATTCTATAGATCAGTCCTCTCTGGACAAACAGCCCTGTTTGAGTTCATCTGGAATTCGTGGTGTAATTTCCCCCAAAGGTTTTTCTTCTGCATGTCATAGTTCATGTAATGAACAGTTCGAAAGGTCTTCTGAACCAGCTAAGAACAAGAAGAGGGCTAGGGCAGGGGAATCTTGTAGGCCTAGGCCAAGGGACAGACAACTGATTCAAGATCGTATCAAGGAGTTGAGAGAGCTAGTGCCAAATGGAGCAAAGTGCAGTATTGATTCGCTGCTGGAGCGCACAATAAAGCACATGCTCTTTTTGCAGAGCATAACTAAGCATGCTGACAAGCTAAACAAATTTGCAGACTCCAAGACAAAGGTACATCACATGGAAGCAGATGTTCTTGGATCATCTGGTTATGAACAGGGTTCAAGTTGGGCAATGGAAGTAGGGGGCCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTAAACAAGAATGGGCAGATGCTCATTGAGATGCTGTGTGAGGAGTGCACCCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGCCTGACAATTTTGACGGGTACGACAGAAGCTCATGGTGAGAAGACATGGATTTGTTTTGTGGTTGAGGGCCAAAACAACAGAAATGTACATAGATTAGATATATTGTGGCCGCTCGTGCAAATGCTGCAATCCCAGAGTACCATGCATTCACAATGA 2076 0.4311 MGTNLQQVLRSLCLNSEWKYAIFWKLKHHARMILTWEDGYYDNPDEHDSLENKPSQQASERVEGGHFSHDPLGLAVAKMSYRVYTLGEGIVGQVAVTGKHRWIFSGNQVAGSGSSYEFVDDWQPQFSVGIKTIAVVAVVPLGVVQLGSLNNVIEDADIVTHIRNLFLPTQHYTIGHTLNQIQCSAKNFSPLEMAVDMAKHGGSEFNFDESDILLQSMSNMMDLENQKFLEIRSLNERGYAVGTSGCKHVRVESEKNMPSLSQNSVSNINSFEDLISPPEKVGSHSAGIPAGFVDAIVHGSDKLPYVEPNQQGVSSVSRPSDADFQKGRLKSEFQTSPCYKDVPFTMLKFPAGWELHEALGPAFLRRNECCDWDAWVNQDIKTAEMPDEISCSQLTSESRQEHLLEAVVANVHHSNNDANSDLSFCSSVQSGVASGTNPEAATHTMRTINSECYSIDQSSLDKQPCLSSSGIRGVISPKGFSSACHSSCNEQFERSSEPAKNKKRARAGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLNKFADSKTKVHHMEADVLGSSGYEQGSSWAMEVGGHLKVHSILVENLNKNGQMLIEMLCEECTHFLEIAEAIRSLGLTILTGTTEAHGEKTWICFVVEGQNNRNVHRLDILWPLVQMLQSQSTMHSQ 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2441 691 MobiDBLite consensus disorder prediction 495 517 - -
Prci1g2441 691 MobiDBLite consensus disorder prediction 492 517 - -
Prci1g2441 691 MobiDBLite consensus disorder prediction 47 66 - -
Prci1g2441 691 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 518 560 IPR036638 GO:0046983
Prci1g2441 691 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Prci1g2441 691 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 505 554 IPR011598 GO:0046983
Prci1g2441 691 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 214 690 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2441 Prci-Chr1 44648802 44655659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2441 351 686 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 51.801 6.81e-90 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2441 - - gmx:100798490 885.945