Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2440 ATGGGTACCAACTTGCAGCAAGTACTCAGGAGCCTCTGTTTGAATTCTGAGTGGAAGTACGCCATCTTTTGGAAACTTAAACATCATGCTCGCATGATCTTGACTTGGGAGGATGGTTACTATGACAATCCTGATGAACATGACTCCTTAGAGAATAAGCCCAGCCAGCAGGCCTCAGAACGGGTTGAGGGTGGTCATTTCTCGCATGACCCTCTGGGGTTAGCTGTGGCAAAGATGTCATATCGTGTATATACTTTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCGGTGGATCTTTTCTGGTAATCAAGTTGCAGGTTCTGGCTCATCATATGAATTTGTTGATGACTGGCAACCCCAGTTTTCTGTTGGAATCAAGACCATTGCTGTTGTAGCTGTGGTCCCACTTGGAGTTGTTCAGCTTGGCTCATTAAATAATGTGATAGAAGATGCGGATATTGTAACTCACATCAGAAATCTTTTTCTGCCTACTCAGCATTACACAATAGGCCATACACTTAACCAAATACAATGTAGTGCAAAGAATTTCTCGCCTCTGGATGTGGAGAAAATCAGAAAGAGTGAGACACTGAATAATTTGATGTCCTCCCCATTTTCTGACAACAACTTACCTTCCTGTGTTACTCAGGAAATGGCTGTTGATATGGCCAAGCATGGGGGTTCTGAATTTAACTTTGATGAAAGTGACATCTTACTTCAGTCAATGTCAAATATGATGGATCTGGAGAATCAGAAATTTTTAGAGATCAGATCTCTAAATGAGAGAGGTTATGCAGTGGGCACTAGTGGCTGCAAACACGTGAGGGTGGAATCAGAAAAAAATATGCCATCATTGTCACAGAATTCTGTTTCAAATATTAATAGCTTCGAAGATTTAATATCTCCACCAGAGAAGGTTGGATCTCATTCTGCTGGCATCCCTGCAGGCTTTGTTGATGCTATTGTTCATGGAAGTGATAAGCTACCTTATGTGGAGCCTAACCAACAAGGCGTCTCCAGTGTCTCTAGACCTTCAGATGCAGACTTCCAAAAGGGCAGATTAAAGTCAGAATTTCAGACTAGTCCTTGTTACAAGGATGTCCCATTCACAATGTTGAAGTTCCCTGCTGGCTGGGAGCTGCATGAAGCACTTGGACCAGCTTTTTTGAGACGTAATGAATGCTGTGATTGGGATGCATGGGTGAATCAAGATATTAAAACTGCAGAGATGCCAGATGAGATTAGCTGTAGCCAGTTGACTTCTGAGTCTCGTCAAGAACATCTTTTGGAGGCAGTTGTAGCCAATGTTCACCACAGTAATAATGACGCAAATAGTGACTTATCATTTTGTTCATCAGTGCAGTCTGGCGTAGCATCTGGAACAAATCCTGAAGCTGCTACTCATACCATGCGCACTATTAATTCAGAATGTTATTCTATAGATCAGTCCTCTCTGGACAAACAGCCCTGTTTGAGTTCATCTGGAATTCGTGGTGTAATTTCCCCCAAAGGTTTTTCTTCTGCATGTCATAGTTCATGTAATGAACAGTTCGAAAGGTCTTCTGAACCAGCTAAGAACAAGAAGAGGGCTAGGGCAGGGGAATCTTGTAGGCCTAGGCCAAGGGACAGACAACTGATTCAAGATCGTATCAAGGAGTTGAGAGAGCTAGTGCCAAATGGAGCAAAGTGCAGTATTGATTCGCTGCTGGAGCGCACAATAAAGCACATGCTCTTTTTGCAGAGCATAACTAAGCATGCTGACAAGCTAAACAAATTTGCAGACTCCAAGACAAAGGTACATCACATGGAAGCAGATGTTCTTGGATCATCTGGTTATGAACAGGGTTCAAGTTGGGCAATGGAAGTAGGGGGCCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTAAACAAGAATGGGCAGATGCTCATTGAGATGCTGTGTGAGGAGTGCACCCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGCCTGACAATTTTGACGGGTACGACAGAAGCTCATGGTGAGAAGACATGGATTTGTTTTGTGGTTGAGGGCCAAAACAACAGAAATGTACATAGATTAGATATATTGTGGCCGCTCGTGCAAATGCTGCAATCCCAGAGTACCATGCATTCACAATGA 2166 0.4298 MGTNLQQVLRSLCLNSEWKYAIFWKLKHHARMILTWEDGYYDNPDEHDSLENKPSQQASERVEGGHFSHDPLGLAVAKMSYRVYTLGEGIVGQVAVTGKHRWIFSGNQVAGSGSSYEFVDDWQPQFSVGIKTIAVVAVVPLGVVQLGSLNNVIEDADIVTHIRNLFLPTQHYTIGHTLNQIQCSAKNFSPLDVEKIRKSETLNNLMSSPFSDNNLPSCVTQEMAVDMAKHGGSEFNFDESDILLQSMSNMMDLENQKFLEIRSLNERGYAVGTSGCKHVRVESEKNMPSLSQNSVSNINSFEDLISPPEKVGSHSAGIPAGFVDAIVHGSDKLPYVEPNQQGVSSVSRPSDADFQKGRLKSEFQTSPCYKDVPFTMLKFPAGWELHEALGPAFLRRNECCDWDAWVNQDIKTAEMPDEISCSQLTSESRQEHLLEAVVANVHHSNNDANSDLSFCSSVQSGVASGTNPEAATHTMRTINSECYSIDQSSLDKQPCLSSSGIRGVISPKGFSSACHSSCNEQFERSSEPAKNKKRARAGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLNKFADSKTKVHHMEADVLGSSGYEQGSSWAMEVGGHLKVHSILVENLNKNGQMLIEMLCEECTHFLEIAEAIRSLGLTILTGTTEAHGEKTWICFVVEGQNNRNVHRLDILWPLVQMLQSQSTMHSQ 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2440 721 MobiDBLite consensus disorder prediction 525 547 - -
Prci1g2440 721 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Prci1g2440 721 MobiDBLite consensus disorder prediction 47 66 - -
Prci1g2440 721 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 720 IPR043561 GO:0003700|GO:0006355
Prci1g2440 721 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 535 584 IPR011598 GO:0046983
Prci1g2440 721 MobiDBLite consensus disorder prediction 521 547 - -
Prci1g2440 721 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 548 590 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2440 Prci-Chr1 44648802 44655660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2440 1 716 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 41.101 6.53e-149 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2440 - - gmx:100798490 907.901