Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2439 ATGGGTACCAACTTGCAGCAAGTACTCAGGAGCCTCTGTTTGAATTCTGAGTGGAAGATCTTGACTTGGGAGGATGGTTACTATGACAATCCTGATGAACATGACTCCTTAGAGAATAAGCCCAGCCAGCAGGCCTCAGAACGGGTTGAGGGTGGTCATTTCTCGCATGACCCTCTGGGGTTAGCTGTGGCAAAGATGTCATATCGTGTATATACTTTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCGGTGGATCTTTTCTGGTAATCAAGTTGCAGGTTCTGGCTCATCATATGAATTTGTTGATGACTGGCAACCCCAGTTTTCTGTTGGAATCAAGACCATTGCTGTTGTAGCTGTGGTCCCACTTGGAGTTGTTCAGCTTGGCTCATTAAATAATGTGATAGAAGATGCGGATATTGTAACTCACATCAGAAATCTTTTTCTGCCTACTCAGCATTACACAATAGGCCATACACTTAACCAAATACAATGTAGTGCAAAGAATTTCTCGCCTCTGGATGTGGAGAAAATCAGAAAGAGTGAGACACTGAATAATTTGATGTCCTCCCCATTTTCTGACAACAACTTACCTTCCTGTGTTACTCAGGAAATGGCTGTTGATATGGCCAAGCATGGGGGTTCTGAATTTAACTTTGATGAAAGTGACATCTTACTTCAGTCAATGTCAAATATGATGGATCTGGAGAATCAGAAATTTTTAGAGATCAGATCTCTAAATGAGAGAGGTTATGCAGTGGGCACTAGTGGCTGCAAACACGTGAGGGTGGAATCAGAAAAAAATATGCCATCATTGTCACAGAATTCTGTTTCAAATATTAATAGCTTCGAAGATTTAATATCTCCACCAGAGAAGGTTGGATCTCATTCTGCTGGCATCCCTGCAGGCTTTGTTGATGCTATTGTTCATGGAAGTGATAAGCTACCTTATGTGGAGCCTAACCAACAAGGCGTCTCCAGTGTCTCTAGACCTTCAGATGCAGACTTCCAAAAGGGCAGATTAAAGTCAGAATTTCAGACTAGTCCTTGTTACAAGGATGTCCCATTCACAATGTTGAAGTTCCCTGCTGGCTGGGAGCTGCATGAAGCACTTGGACCAGCTTTTTTGAGACGTAATGAATGCTGTGATTGGGATGCATGGGTGAATCAAGATATTAAAACTGCAGAGATGCCAGATGAGATTAGCTGTAGCCAGTTGACTTCTGAGTCTCGTCAAGAACATCTTTTGGAGGCAGTTGTAGCCAATGTTCACCACAGTAATAATGACGCAAATAGTGACTTATCATTTTGTTCATCAGTGCAGTCTGGCGTAGCATCTGGAACAAATCCTGAAGCTGCTACTCATACCATGCGCACTATTAATTCAGAATGTTATTCTATAGATCAGTCCTCTCTGGACAAACAGCCCTGTTTGAGTTCATCTGGAATTCGTGGTGTAATTTCCCCCAAAGGTTTTTCTTCTGCATGTCATAGTTCATGTAATGAACAGTTCGAAAGGTCTTCTGAACCAGCTAAGAACAAGAAGAGGGCTAGGGCAGGGGAATCTTGTAGGCCTAGGCCAAGGGACAGACAACTGATTCAAGATCGTATCAAGGAGTTGAGAGAGCTAGTGCCAAATGGAGCAAAGTGCAGTATTGATTCGCTGCTGGAGCGCACAATAAAGCACATGCTCTTTTTGCAGAGCATAACTAAGCATGCTGACAAGCTAAACAAATTTGCAGACTCCAAGACAAAGGTACATCACATGGAAGCAGATGTTCTTGGATCATCTGGTTATGAACAGGGTTCAAGTTGGGCAATGGAAGTAGGGGGCCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTAAACAAGAATGGGCAGATGCTCATTGAGATGCTGTGTGAGGAGTGCACCCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGCCTGACAATTTTGACGGGTACGACAGAAGCTCATGGTGAGAAGACATGGATTTGTTTTGTGGTTGAGGGCCAAAACAACAGAAATGTACATAGATTAGATATATTGTGGCCGCTCGTGCAAATGCTGCAATCCCAGAGTACCATGCATTCACAATGA 2127 0.4302 MGTNLQQVLRSLCLNSEWKILTWEDGYYDNPDEHDSLENKPSQQASERVEGGHFSHDPLGLAVAKMSYRVYTLGEGIVGQVAVTGKHRWIFSGNQVAGSGSSYEFVDDWQPQFSVGIKTIAVVAVVPLGVVQLGSLNNVIEDADIVTHIRNLFLPTQHYTIGHTLNQIQCSAKNFSPLDVEKIRKSETLNNLMSSPFSDNNLPSCVTQEMAVDMAKHGGSEFNFDESDILLQSMSNMMDLENQKFLEIRSLNERGYAVGTSGCKHVRVESEKNMPSLSQNSVSNINSFEDLISPPEKVGSHSAGIPAGFVDAIVHGSDKLPYVEPNQQGVSSVSRPSDADFQKGRLKSEFQTSPCYKDVPFTMLKFPAGWELHEALGPAFLRRNECCDWDAWVNQDIKTAEMPDEISCSQLTSESRQEHLLEAVVANVHHSNNDANSDLSFCSSVQSGVASGTNPEAATHTMRTINSECYSIDQSSLDKQPCLSSSGIRGVISPKGFSSACHSSCNEQFERSSEPAKNKKRARAGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLNKFADSKTKVHHMEADVLGSSGYEQGSSWAMEVGGHLKVHSILVENLNKNGQMLIEMLCEECTHFLEIAEAIRSLGLTILTGTTEAHGEKTWICFVVEGQNNRNVHRLDILWPLVQMLQSQSTMHSQ 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2439 708 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 535 577 IPR036638 GO:0046983
Prci1g2439 708 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 522 571 IPR011598 GO:0046983
Prci1g2439 708 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 707 IPR043561 GO:0003700|GO:0006355
Prci1g2439 708 MobiDBLite consensus disorder prediction 508 534 - -
Prci1g2439 708 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 153 IPR025610 -
Prci1g2439 708 MobiDBLite consensus disorder prediction 512 534 - -
Prci1g2439 708 MobiDBLite consensus disorder prediction 32 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2439 Prci-Chr1 44648669 44655661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2439 1 703 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.077 6.62e-138 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2439 - - gmx:100798490 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2439 1 44648669 44655661 Prci3g3214 3 43223904 43231440 CCT
Prci1g2439 1 44648669 44655661 Prci1g2439 1 44648669 44655661 ECH