Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2438 ATGGGTACCAACTTGCAGCAAGTACTCAGGAGCCTCTGTTTGAATTCTGAGTGGAAGTACGCCATCTTTTGGAAACTTAAACATCATGCTCGCATGATCTTGACTTGGGAGGATGGTTACTATGACAATCCTGATGAACATGACTCCTTAGAGAATAAGCCCAGCCAGCAGGCCTCAGAACGGGTTGAGGGTGGTCATTTCTCGCATGACCCTCTGGGGTTAGCTGTGGCAAAGATGTCATATCGTGTATATACTTTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCGGTGGATCTTTTCTGGTAATCAAGTTGCAGGTTCTGGCTCATCATATGAATTTGTTGATGACTGGCAACCCCAGTTTTCTGTTGGAATCAAGACCATTGCTGTTGTAGCTGTGGTCCCACTTGGAGTTGTTCAGCTTGGCTCATTAAATAATGTGATAGAAGATGCGGATATTGTAACTCACATCAGAAATCTTTTTCTGCCTACTCAGCATTACACAATAGGCCATACACTTAACCAAATACAATGTAGTGCAAAGAATTTCTCGCCTCTGGATGTGGAGAAAATCAGAAAGAGTGAGACACTGAATAATTTGATGTCCTCCCCATTTTCTGACAACAACTTACCTTCCTGTGTTACTCAGGAAATGGCTGTTGATATGGCCAAGCATGGGGGTTCTGAATTTAACTTTGATGAAAGTGACATCTTACTTCAGTCAATGTCAAATATGATGGATCTGGAGAATCAGAAATTTTTAGAGATCAGATCTCTAAATGAGAGAGGTTATGCAGTGGGCACTAGTGGCTGCAAACACGTGAGGGTGGAATCAGAAAAAAATATGCCATCATTGTCACAGAATTCTGTTTCAAATATTAATAGCTTCGAAGATTTAATATCTCCACCAGAGAAGGTTGGATCTCATTCTGCTGGCATCCCTGCAGGCTTTGTTGATGCTATTGTTCATGGAAGTGATAAGCTACCTTATGTGGAGCCTAACCAACAAGGCGTCTCCAGTGTCTCTAGACCTTCAGATGCAGACTTCCAAAAGGGCAGATTAAAGTCAGAATTTCAGACTAGTCCTTGTTACAAGGATGTCCCATTCACAATGTTGAAGTTCCCTGCTGGCTGGGAGCTGCATGAAGCACTTGGACCAGCTTTTTTGAGACGTAATGAATGCTGTGATTGGGATGCATGGGTGAATCAAGATATTAAAACTGCAGAGATGCCAGATGAGATTAGCTGTAGCCAGTTGACTTCTGAGTCTCGTCAAGAACATCTTTTGGAGGCAGTTGTAGCCAATGTTCACCACAGTAATAATGACGCAAATAGTGACTTATCATTTTGTTCATCAGTGCAGTCTGGCGTAGCATCTGGAACAAATCCTGAAGCTGCTACTCATACCATGCGCACTATTAATTCAGAATGTTATTCTATAGATCAGTCCTCTCTGGACAAACAGCCCTGTTTGAGTTCATCTGGAATTCGTGGTGTAATTTCCCCCAAAGGTTTTTCTTCTGCATGTCATAGTTCATGTAATGAACAGTTCGAAAGGTCTTCTGAACCAGCTAAGAACAAGAAGAGGGCTAGGGCAGGGGAATCTTGTAGGCCTAGGCCAAGGGACAGACAACTGATTCAAGATCGTATCAAGGAGTTGAGAGAGCTAGTGCCAAATGGAGCAAAGAGCATAACTAAGCATGCTGACAAGCTAAACAAATTTGCAGACTCCAAGACAAAGGTACATCACATGGAAGCAGATGTTCTTGGATCATCTGGTTATGAACAGGGTTCAAGTTGGGCAATGGAAGTAGGGGGCCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTAAACAAGAATGGGCAGATGCTCATTGAGATGCTGTGTGAGGAGTGCACCCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGCCTGACAATTTTGACGGGTACGACAGAAGCTCATGGTGAGAAGACATGGATTTGTTTTGTGGTTGAGGGCCAAAACAACAGAAATGTACATAGATTAGATATATTGTGGCCGCTCGTGCAAATGCTGCAATCCCAGAGTACCATGCATTCACAATGA 2112 0.429 MGTNLQQVLRSLCLNSEWKYAIFWKLKHHARMILTWEDGYYDNPDEHDSLENKPSQQASERVEGGHFSHDPLGLAVAKMSYRVYTLGEGIVGQVAVTGKHRWIFSGNQVAGSGSSYEFVDDWQPQFSVGIKTIAVVAVVPLGVVQLGSLNNVIEDADIVTHIRNLFLPTQHYTIGHTLNQIQCSAKNFSPLDVEKIRKSETLNNLMSSPFSDNNLPSCVTQEMAVDMAKHGGSEFNFDESDILLQSMSNMMDLENQKFLEIRSLNERGYAVGTSGCKHVRVESEKNMPSLSQNSVSNINSFEDLISPPEKVGSHSAGIPAGFVDAIVHGSDKLPYVEPNQQGVSSVSRPSDADFQKGRLKSEFQTSPCYKDVPFTMLKFPAGWELHEALGPAFLRRNECCDWDAWVNQDIKTAEMPDEISCSQLTSESRQEHLLEAVVANVHHSNNDANSDLSFCSSVQSGVASGTNPEAATHTMRTINSECYSIDQSSLDKQPCLSSSGIRGVISPKGFSSACHSSCNEQFERSSEPAKNKKRARAGESCRPRPRDRQLIQDRIKELRELVPNGAKSITKHADKLNKFADSKTKVHHMEADVLGSSGYEQGSSWAMEVGGHLKVHSILVENLNKNGQMLIEMLCEECTHFLEIAEAIRSLGLTILTGTTEAHGEKTWICFVVEGQNNRNVHRLDILWPLVQMLQSQSTMHSQ 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2438 703 MobiDBLite consensus disorder prediction 525 547 - -
Prci1g2438 703 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 702 IPR043561 GO:0003700|GO:0006355
Prci1g2438 703 MobiDBLite consensus disorder prediction 521 547 - -
Prci1g2438 703 MobiDBLite consensus disorder prediction 47 66 - -
Prci1g2438 703 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2438 Prci-Chr1 44648669 44655665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2438 1 698 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 38.796 1.46e-130 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2438 - - gmx:100798490 861.677