Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2436 ATGACTGGTTCTGGTTCTCCCTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGCTGTGTTTTTGCACCTTACTTTTGCCACGAACAAGGTGCATCTCATTTTGCGGCCATTCATAAGGTTTTTGGTGCAAGCAACGTCTCTAAGCTTCTGGCTCACCTCCCTGTAAGTGACCGCTGTGAAGCTGCAGTGACCATCTCATATGAAGCTCAAGCTAGAGTTCAGGATCCTATTTATGGCTGCGTTTCCCATATCTTCGCCCTCCAACAACAAGTGGTTAATTTACAAGCTCAGCTGGCTTATCTGAGGGAGCAAGCAGCTCAGAGCCATATTGTGAATGCCTCTGTCACTGAAAACCCTAATAAACCTACTGCTTTCACCGATCATGATCTTCAAAAGTGGTTCCCGACCGAGGATCCCACCAACACTGGGACTCAATTTCTTCCCAGCTCGTCTGACATCAATTCCCTTGCAACACAGTACTACGGGAATTACACTACTCCTTTCGTGGATCCAAACCCTATTGGGAGTTCAGGAACCATTGAAGAAAGTGCTTCATTTTCGAGCTTTCATGAGGAAACCAACTGTAACTCCATGTCCTTAGACATGCAAGCAAGCAGTAGGCAGTGGAGCTTTCGTGAAGTGGACGACCTTCAGTCAGTGGCTTTTGGTTACAGTGGATGA 690 0.4681 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGASHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARVQDPIYGCVSHIFALQQQVVNLQAQLAYLREQAAQSHIVNASVTENPNKPTAFTDHDLQKWFPTEDPTNTGTQFLPSSSDINSLATQYYGNYTTPFVDPNPIGSSGTIEESASFSSFHEETNCNSMSLDMQASSRQWSFREVDDLQSVAFGYSG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2436 229 Coils Coil 87 107 - -
Prci1g2436 229 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Prci1g2436 229 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Prci1g2436 229 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2436 Prci-Chr1 44628846 44630268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2436 7 227 AS2 family AT3G58190 54.626 4.33e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci1g2436 LOB 4.8e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2436 1 44628846 44630268 Prci1g2436 1 44628846 44630268 ECH