Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2435 ATGGCTTGTTCTGGAAGTAATAGTGGGAATGGGAGCGGAGGGTCAGGGTCCCCTTGTGGGGCATGCAAGTTTCTGAGAAGGAAGTGTGCGGCTGACTGTATATTTGCCCCTTATTTCTGCTCTGAACAAGGCCCTGCAAGTTTTGCTGCCATACACAAGGTTTTTGGTGCTAGTAATGTCTCCAAACTGCTCCTCAATTTACCTCCCCATGATCGTTGTGAGGCTGTCCTCACTATTGCCTATGAAGCTCAGGCTCGTATCAGAGACCCTGTTTATGGCTGTGTCTCCCACATTTTCGCCTTACAACAACAGGTGGCATGCTTGCAAGCACAACTGATGCAAGCCAAGGCGCAGTTGGCTGAGAAGAGCATGGCGAACGAAGAGTGCTGGGGAAGGAATGGTTATGGGCAAGCAATGAATCCAATCTATGGGACTAGTTACACCAATATGAACCCTATATCTCCGCAGAGTTCTCTTGATTCAATTGATTACAGTAGCATCCACGATGGATCCATGAATTTGCAGCAAGAGGATTTCTCTTTGCTGCAACCTCGCTCCAATAAGAAAAGTTCATCATATGATAGCAATGACCTGAGCGAGCTTCAAGAGCTAGCACTCAGAATGATGAGAAACTAG 636 0.4717 MACSGSNSGNGSGGSGSPCGACKFLRRKCAADCIFAPYFCSEQGPASFAAIHKVFGASNVSKLLLNLPPHDRCEAVLTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAQLAEKSMANEECWGRNGYGQAMNPIYGTSYTNMNPISPQSSLDSIDYSSIHDGSMNLQQEDFSLLQPRSNKKSSSYDSNDLSELQELALRMMRN 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2435 211 ProSiteProfiles LOB domain profile. 17 119 IPR004883 -
Prci1g2435 211 PANTHER LOB DOMAIN CONTAINING PROTEIN 14 175 - -
Prci1g2435 211 Coils Coil 98 125 - -
Prci1g2435 211 Pfam Lateral organ boundaries (LOB) domain 18 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2435 Prci-Chr1 44617061 44618754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2435 6 211 AS2 family AT2G42430 55.328 6.39e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci1g2435 LOB 6.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2435 K13944 - gmx:100801508 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2435 1 44617061 44618754 Prci3g3221 3 43258191 43259315 CCT
Prci1g2435 1 44617061 44618754 Prci1g2435 1 44617061 44618754 ECH