Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci1g2421 | ATGGCTGTCGACGCCCTCCAACTTCGTCGTCATTCTCTCTCCGGACCTCCCTCCGATCCTCCTCCGCTCCCTCCCAAGGCCGTCCGTTTCGGCGGTGTCGCCTCTAAGGAGGCGCATTTTAGAGGCGTGCGTAAGCGTCCCTGGGGCCGCTTCGCCGCGGAGATCCGCGATCCCTGGAAGAAGACCCGAAGGTGGCTCGGAACCTTCGATACCGCCGAGGAGGCTGCTCGGGCCTACGATGAGGCTGCCAGGAGTCTTCGTGGACCCAGGGCAAAGACGAACTTCATCTATGCCGCTGTGCCTGTCGCTCCGTCGGTCCCAATGCCACCGGTGGCAGCTTCCACGGCTAGTGGCGGTGATCGAGATAGCGGGCAGATGTTGGGGAGGCGCGTGGAGTTTTGGAGGCCTCCGTTGCATTGCGTGGCGGATGCTACGGTGGGAGTGCCGGTGAGATCGGAGTACAAGGGATACAAGTTGGAGAATGTGGATGTGGTGGTGAGCGAGGAGAGAAAGTTGCGGAAACAGGAGAAACCGTTAATGCTCGATCTTAACCAACCACCGCCACTCTTCTGA | 573 | 0.6073 | MAVDALQLRRHSLSGPPSDPPPLPPKAVRFGGVASKEAHFRGVRKRPWGRFAAEIRDPWKKTRRWLGTFDTAEEAARAYDEAARSLRGPRAKTNFIYAAVPVAPSVPMPPVAASTASGGDRDSGQMLGRRVEFWRPPLHCVADATVGVPVRSEYKGYKLENVDVVVSEERKLRKQEKPLMLDLNQPPPLF | 190 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci1g2421 | 190 | PRINTS | Ethylene responsive element binding protein signature | 62 | 78 | IPR001471 | GO:0003700|GO:0006355 | |
Prci1g2421 | 190 | PRINTS | Ethylene responsive element binding protein signature | 40 | 51 | IPR001471 | GO:0003700|GO:0006355 | |
Prci1g2421 | 190 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Prci1g2421 | 190 | FunFam | Ethylene-responsive transcription factor 2 | 38 | 97 | - | - | |
Prci1g2421 | 190 | SUPERFAMILY | DNA-binding domain | 39 | 96 | IPR016177 | GO:0003677 | |
Prci1g2421 | 190 | SMART | rav1_2 | 39 | 102 | IPR001471 | GO:0003700|GO:0006355 | |
Prci1g2421 | 190 | Pfam | AP2 domain | 39 | 88 | IPR001471 | GO:0003700|GO:0006355 | |
Prci1g2421 | 190 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 33 | 116 | - | - | |
Prci1g2421 | 190 | CDD | AP2 | 38 | 95 | IPR001471 | GO:0003700|GO:0006355 | |
Prci1g2421 | 190 | ProSiteProfiles | AP2/ERF domain profile. | 39 | 96 | IPR001471 | GO:0003700|GO:0006355 | |
Prci1g2421 | 190 | Gene3D | AP2/ERF domain | 38 | 97 | IPR036955 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci1g2421 | Prci-Chr1 | 44388709 | 44390055 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci1g2421 | 36 | 123 | AP2-EREBP Transcription Factor Family | AT5G44210 | 64.773 | 2.29e-32 | 114 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Prci1g2421 | AP2 | 9.6e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci1g2421 | K09286 | - | qsa:O6P43_006945 | 236.498 |