Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2418 ATGGCGCTTTCAGGATCTGTGGTAGATCTTCAACCTGCCTTAAAGAAGAAAACTGTTGTTTCGAGAAGCTGGATTCTGCTGGACCGCAATGGCAACAGCACCGTGCTGGATGTTGACAAGTACGCTATTATGCGCCTGGTTGAAATTCACGCAAGAGATCTTCGAATTCTTGATCCGCTGTTATCGTATCCTTCAACCATTTTGGGCAGAGAGAAGGTCATTGTCCTCAATTTAGAGCATATTAAGGCTATAATCACTGCAGAGGAGGTGTTGCTTAGAGACCCGCTGGATGATGATGTTATTCCTATTGTTGAGCAACTTCAAAGAAGGTTGCCCAAAGTGTCTGGTACAGGGCAAGGCCTAGGAGAAGAAGAAGAGACATGCGCTCAAGAAGTGGAAGGCGACGAAGAAAATGAATTTCCGTTTGAGTTCCATGCCTTGGAGGTTGCGTTAGAGGCAATTTGTAGTTTTCTTGATGCGCGGACGAGAGAATTAGAGACCGCTGCTTATCCAGCTTTAGATGAGCTCACCTCTAAGATTAGCAGTCGTAACTTGGATAGAGTGCGCAAACTGAAAAGTGCAATGACCAGGTTGACAAATAGAGTTCAAAAGATAAGAGATGAACTAGAAAATCTACTGGATGATGATGATGATATGGCCGACCTTTACTTATCAAGAAAGATGGCTGTCTCGTGTTCCCCTGCTAGTAGCTGCGATGCTCCCAATTGGATTCTTAGCTCTCCAACTATAGGCTCAAGGGTTCGCAGATCAAGCAGAGCAAGTGCAACAACATTTCAAGGGGAGAATGATGTTGAGGAACTTGAAATGTTACTCGAGGCTTATTTCATGCAAATTGATAGCACATTAAATAAACTAACCACCCTGCGAGAGTATATTGATGACACGGAAGATTACATCAACATACAGCTTGACAATCACCGAAACCAACTGATTCAGCTAGAGCTCTTCCTCAGTTCTGGGACTGTGTGCCTGTCCATATATTCCTTGGTGGGTGCAATATTTGGTATGAACATCCCGTACACATGGAAAGAAGGACACGGATATATGTTCAAATGGGTGGTAATCTTTACGGGAATAGTTTGCGGCTCCCTGTTTTTGTCCATAGTATCATATGCTCGACGCAAAGGTCTTGTTGGGTCTTGA 1164 0.4399 MALSGSVVDLQPALKKKTVVSRSWILLDRNGNSTVLDVDKYAIMRLVEIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITAEEVLLRDPLDDDVIPIVEQLQRRLPKVSGTGQGLGEEEETCAQEVEGDEENEFPFEFHALEVALEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKIRDELENLLDDDDDMADLYLSRKMAVSCSPASSCDAPNWILSSPTIGSRVRRSSRASATTFQGENDVEELEMLLEAYFMQIDSTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVGAIFGMNIPYTWKEGHGYMFKWVVIFTGIVCGSLFLSIVSYARRKGLVGS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2418 387 CDD Mrs2_Mfm1p-like 24 384 IPR039204 -
Prci1g2418 387 Gene3D Magnesium transport protein CorA, transmembrane region 103 317 - -
Prci1g2418 387 Coils Coil 188 215 - -
Prci1g2418 387 Gene3D - 7 95 - -
Prci1g2418 387 FunFam Magnesium transporter MRS2-1 12 95 - -
Prci1g2418 387 Pfam CorA-like Mg2+ transporter protein 272 373 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Prci1g2418 387 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 323 373 IPR045863 -
Prci1g2418 387 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 385 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2418 Prci-Chr1 44352725 44356084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2418 1 360 MRS2 Gene Family AT5G64560 73.641 8.02e-171 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2418 K16075 - qsa:O6P43_006951 606.29