Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2417 ATGGCGCTTTCAGGATCTGTGGTAGATCTTCAACCTGCCTTAAAGAAGAAAACTGTTGTTTCGAGAAGCTGGATTCTGCTGGACCGCAATGGCAACAGCACCGTGCTGGATGTTGACAAGTACGCTATTATGCGCCTGGTTGAAATTCACGCAAGAGATCTTCGAATTCTTGATCCGCTGTTATCGTATCCTTCAACCATTTTGGGCAGAGAGAAGGTCATTGTCCTCAATTTAGAGGTGTTGCTTAGAGACCCGCTGGATGATGATGTTATTCCTATTGTTGAGCAACTTCAAAGAAGGTTGCCCAAAGTGTCTGGTACAGGGCAAGGCCTAGGAGAAGAAGAAGAGACATGCGCTCAAGAAGTGGAAGGCGACGAAGAAAATGAATTTCCGTTTGAGTTCCATGCCTTGGAGGTTGCGTTAGAGGCAATTTGTAGTTTTCTTGATGCGCGGACGAGAGAATTAGAGACCGCTGCTTATCCAGCTTTAGATGAGCTCACCTCTAAGATTAGCAGTCGTAACTTGGATAGAGTGCGCAAACTGAAAAGTGCAATGACCAGGTTGACAAATAGAGTTCAAAAGATAAGAGATGAACTAGAAAATCTACTGGATGATGATGATGATATGGCCGACCTTTACTTATCAAGAAAGATGGCTGTCTCGTGTTCCCCTGCTAGTAGCTGCGATGCTCCCAATTGGATTCTTAGCTCTCCAACTATAGGCTCAAGGGTTCGCAGATCAAGCAGAGCAAGTGCAACAACATTTCAAGGGGAGAATGATGTTGAGGAACTTGAAATGTTACTCGAGGCTTATTTCATGCAAATTGATAGCACATTAAATAAACTAACCACCCTGCGAGAGTATATTGATGACACGGAAGATTACATCAACATACAGCTTGACAATCACCGAAACCAACTGATTCAGCTAGAGCTCTTCCTCAGTTCTGGGACTGTGTGCCTGTCCATATATTCCTTGGTGGGTGCAATATTTGGTATGAACATCCCGTACACATGGAAAGAAGGACACGGATATATGTTCAAATGGGTGGTAATCTTTACGGGAATAGTTTGCGGCTCCCTGTTTTTGTCCATAGTATCATATGCTCGACGCAAAGGTCTTGTTGGGTCTTGA 1134 0.4409 MALSGSVVDLQPALKKKTVVSRSWILLDRNGNSTVLDVDKYAIMRLVEIHARDLRILDPLLSYPSTILGREKVIVLNLEVLLRDPLDDDVIPIVEQLQRRLPKVSGTGQGLGEEEETCAQEVEGDEENEFPFEFHALEVALEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKIRDELENLLDDDDDMADLYLSRKMAVSCSPASSCDAPNWILSSPTIGSRVRRSSRASATTFQGENDVEELEMLLEAYFMQIDSTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVGAIFGMNIPYTWKEGHGYMFKWVVIFTGIVCGSLFLSIVSYARRKGLVGS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2417 377 CDD Mrs2_Mfm1p-like 24 374 IPR039204 -
Prci1g2417 377 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 375 IPR039204 -
Prci1g2417 377 Pfam CorA-like Mg2+ transporter protein 262 363 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Prci1g2417 377 Gene3D Magnesium transport protein CorA, transmembrane region 93 307 - -
Prci1g2417 377 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 313 363 IPR045863 -
Prci1g2417 377 Coils Coil 178 205 - -
Prci1g2417 377 Gene3D - 7 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2417 Prci-Chr1 44352724 44356084 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2417 1 350 MRS2 Gene Family AT5G64560 71.196 1.28e-160 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2417 K16075 - qsa:O6P43_006951 579.711