Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2416 ATGGCGCTTTCAGGATCTGTGGTAGATCTTCAACCTGCCTTAAAGAAGAAAACTGTTGTTTCGAGAAGCTGGATTCTGCTGGACCGCAATGGCAACAGCACCGTGCTGGATGTTGACAAGTACGCTATTATGCGCCTGGTTGAAATTCACGCAAGAGATCTTCGAATTCTTGATCCGCTGTTATCGTATCCTTCAACCATTTTGGGCAGAGAGAAGGTCATTGTCCTCAATTTAGAGCATATTAAGGCTATAATCACTGCAGAGGAGGTGTTGCTTAGAGACCCGCTGGATGATGATGTTATTCCTATTGTTGAGCAACTTCAAAGAAGGTTGCCCAAAGTGTCTGGTACAGGGCAAGGCCTAGGAGAAGAAGAAGAGACATGCGCTCAAGAAGTGGAAGGCGACGAAGAAAATGAATTTCCGTTTGAGTTCCATGCCTTGGAGGTTGCGTTAGAGGCAATTTGTAGTTTTCTTGATGCGCGGACGAGAGAATTAGAGACCGCTGCTTATCCAGCTTTAGATGAGCTCACCTCTAAGATAAGAGATGAACTAGAAAATCTACTGGATGATGATGATGATATGGCCGACCTTTACTTATCAAGAAAGATGGCTGTCTCGTGTTCCCCTGCTAGTAGCTGCGATGCTCCCAATTGGATTCTTAGCTCTCCAACTATAGGCTCAAGGGTTCGCAGATCAAGCAGAGCAAGTGCAACAACATTTCAAGGGGAGAATGATGTTGAGGAACTTGAAATGTTACTCGAGGCTTATTTCATGCAAATTGATAGCACATTAAATAAACTAACCACCCTGCGAGAGTATATTGATGACACGGAAGATTACATCAACATACAGCTTGACAATCACCGAAACCAACTGATTCAGCTAGAGCTCTTCCTCAGTTCTGGGACTGTGTGCCTGTCCATATATTCCTTGGTGGGTGCAATATTTGGTATGAACATCCCGTACACATGGAAAGAAGGACACGGATATATGTTCAAATGGGTGGTAATCTTTACGGGAATAGTTTGCGGCTCCCTGTTTTTGTCCATAGTATCATATGCTCGACGCAAAGGTCTTGTTGGGTCTTGA 1089 0.4426 MALSGSVVDLQPALKKKTVVSRSWILLDRNGNSTVLDVDKYAIMRLVEIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITAEEVLLRDPLDDDVIPIVEQLQRRLPKVSGTGQGLGEEEETCAQEVEGDEENEFPFEFHALEVALEAICSFLDARTRELETAAYPALDELTSKIRDELENLLDDDDDMADLYLSRKMAVSCSPASSCDAPNWILSSPTIGSRVRRSSRASATTFQGENDVEELEMLLEAYFMQIDSTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVGAIFGMNIPYTWKEGHGYMFKWVVIFTGIVCGSLFLSIVSYARRKGLVGS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2416 362 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 360 IPR039204 -
Prci1g2416 362 Pfam CorA-like Mg2+ transporter protein 247 348 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Prci1g2416 362 FunFam Magnesium transporter MRS2-1 12 95 - -
Prci1g2416 362 CDD Mrs2_Mfm1p-like 24 359 IPR039204 -
Prci1g2416 362 Gene3D - 7 95 - -
Prci1g2416 362 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 298 348 IPR045863 -
Prci1g2416 362 Gene3D Magnesium transport protein CorA, transmembrane region 103 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2416 Prci-Chr1 44352721 44356084 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2416 1 335 MRS2 Gene Family AT5G64560 63.859 1.74e-148 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2416 K16075 - qsa:O6P43_006951 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2416 1 44352721 44356084 Prci1g2416 1 44352721 44356084 ECH