Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2408 ATGGAAGTGATCGTAGGTGTGAACAAGGAGAAGATGGGTTTCGAGGAAACAGAACTGAGGCTGGGATTACCCGGAAATAATGGAGGCGGCGCCGAAACAGAAGTGGTTAGGAAGAGAGGTTTCTCTGAGACTGAATCAGAGAGTGTGGATTTGATGTTGAATCTCTCATCGTCAAAGGAATCAGATCCAACTGATAACCTCTGCAAGAATTCCCCAAAGGAGAAGACACTTCTGCCCTCTGATCCTGCCAAGCCTCCAGCCAAGGCGCAAGTGGTGGGTTGGCCACCAGTGAGATCGTTCAGAAAGAACATATTAAAGAGCAGTGGAGAAGAGAGCGAGAAAGGAATCCCTAACAGTAGCGGAAGCTTCGTGAAAGTGAGCATGGATGGAGCTCCTTACCTTCGCAAAGTGGACCTCAAGTTGTACAACACTTACCAAGATCTCTATGACGCCTTGGCCAAAATGTTCAGCTCCTTCACCATAGGCAACTGTGGATCCCAAGGAATGAAGGATTTCATGAATGAGAGTAAGCTGATGAATCTCTTAAAAAGCTTTGACTACGTCCCAACCTACGAAGACAAAGATGGCGACTGGATGCTTGTGGGCGACGTCCCTTGGGAGATGTTTGTGGAATCATGCAAGCGTTTGCGTATCATGAAAGGCAAGGAGGCTATCGGACTTGCACCGAGAGCCATGGAGAAATGCAAGAACAGAAGCTAG 720 0.4792 MEVIVGVNKEKMGFEETELRLGLPGNNGGGAETEVVRKRGFSETESESVDLMLNLSSSKESDPTDNLCKNSPKEKTLLPSDPAKPPAKAQVVGWPPVRSFRKNILKSSGEESEKGIPNSSGSFVKVSMDGAPYLRKVDLKLYNTYQDLYDALAKMFSSFTIGNCGSQGMKDFMNESKLMNLLKSFDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2408 239 MobiDBLite consensus disorder prediction 55 90 - -
Prci1g2408 239 Gene3D - 116 233 - -
Prci1g2408 239 Pfam AUX/IAA family 16 230 IPR033389 -
Prci1g2408 239 MobiDBLite consensus disorder prediction 55 73 - -
Prci1g2408 239 SUPERFAMILY CAD & PB1 domains 112 220 - -
Prci1g2408 239 ProSiteProfiles PB1 domain profile. 121 221 IPR000270 GO:0005515
Prci1g2408 239 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 226 IPR003311 GO:0005634|GO:0006355
Prci1g2408 239 FunFam Auxin-responsive protein 117 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2408 Prci-Chr1 44272752 44275113 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2408 112 224 B3 DNA Binding Superfamily AT3G61830 31.858 5.32e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Prci1g2408 AUX_IAA 3.8e-80 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2408 K14484 - zju:107425884 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2408 1 44272752 44275113 Prci1g2408 1 44272752 44275113 ECH