Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2392 ATGAGTCAGAAGAAGAACCCTCTTGTGTTTCTAGACGTCTCAATTGATGGGGATCTTGTGGAACGAGTTGTTATAGAGCTTTTCGCCAGTATTGTTCCCAAGACAGCTGAAAATTTCCGGGCACTTTGTACAGGTGAGAAGGGCATTGGAAAATCAACCGGAAAACCTTTGCATTATAAAGGAACTTGTTTTCATCGTATAATTAAAGGATTCATGGCCCAAGGTGGTGACTTTTCAAGGGGAAATGGAACTGGTGGAGAAAGTATATATGGAGGAAAGTTTGCTGATGAAAATTTCATATTAAAGCATGACGGACCTGGTCTTCTATCCATGGCTAATGGTGGCCCAAACACAAATGGTTCCCAATTCTTTATTACCTTCAAGCGCCAACCACATCTTGATGGGAAACATGTCGTTTTTGGAAAAGTTGTTGGTGGATTAGATCTTCTGAAGAAAATTGAACTGGTGGGGACATCAGATGGGAAACCTGTTCGGCCTGTTAAAATCATTGATTGTGGTGAAGCAACTGAAGCGAAAATTCAGCCGAAAATTGGGAAAGAGAAAGGTAAAAAGAGAAAATCTGGGGAATCTTCAACTTCTGATGACAGTTCTGACAAAAAATCAAAAGGAAAAAGGAAAACATCTTCCAAGGATTTGAGAAAGAGGAGGAGATACTCAACATCTGATTCACACAGCTCAGATAGTGATAGTGATTCTGACTCAGATTCAGGGTCAGAATCATCGCTATCTGATTCAAGTTCCTCTAGCTATGGTAAACATCGGAAGAGAAAACCTGAGAAAAGATCTAGGCACAAGCAGGGGAAGAAGAGGAGAAACGGGCATAAGCAAAGGAGAAGCCGGCATAATAGACGATCAAGACGCATGTCCAGATGGAGCTCAGAGGATTCAAGTGATACTGAAAGTGATAGTACTAGTAGTAGTGAGAGCAGTTCTGATGATAAGAAAGCTCATTGCCGTGTCTCTGGTCGTAAAACACATGCTGACAGCAAACAAAAAAGAAGTTCAGAAACAGGAAAGCAATCTCCCAGTCCTCCCTTAGTTAAAGCTTCTCCAGATCAAGGGGAAGATTTCAAGGTCAGAAGAACCGCGGACAAGCAATCACATGAAGAAGAGGATCAATTCCTAGAAGAAGTGATGCAATGA 1164 0.4158 MSQKKNPLVFLDVSIDGDLVERVVIELFASIVPKTAENFRALCTGEKGIGKSTGKPLHYKGTCFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFILKHDGPGLLSMANGGPNTNGSQFFITFKRQPHLDGKHVVFGKVVGGLDLLKKIELVGTSDGKPVRPVKIIDCGEATEAKIQPKIGKEKGKKRKSGESSTSDDSSDKKSKGKRKTSSKDLRKRRRYSTSDSHSSDSDSDSDSDSGSESSLSDSSSSSYGKHRKRKPEKRSRHKQGKKRRNGHKQRRSRHNRRSRRMSRWSSEDSSDTESDSTSSSESSSDDKKAHCRVSGRKTHADSKQKRSSETGKQSPSPPLVKASPDQGEDFKVRRTADKQSHEEEDQFLEEVMQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2392 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Prci1g2392 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Prci1g2392 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Prci1g2392 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Prci1g2392 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Prci1g2392 387 MobiDBLite consensus disorder prediction 360 387 - -
Prci1g2392 387 CDD cyclophilin_ABH_like 7 173 - -
Prci1g2392 387 MobiDBLite consensus disorder prediction 314 342 - -
Prci1g2392 387 MobiDBLite consensus disorder prediction 180 212 - -
Prci1g2392 387 MobiDBLite consensus disorder prediction 180 387 - -
Prci1g2392 387 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Prci1g2392 387 Gene3D - 1 181 IPR029000 -
Prci1g2392 387 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Prci1g2392 387 MobiDBLite consensus disorder prediction 221 238 - -
Prci1g2392 387 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Prci1g2392 387 MobiDBLite consensus disorder prediction 260 294 - -
Prci1g2392 387 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Prci1g2392 387 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Prci1g2392 387 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2392 Prci-Chr1 44154516 44160952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2392 25 171 U-box Gene Family AT5G67530 48.993 1.77e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2392 K09566 - gmx:100807327 406.757