Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2390 ATGAGTCAGAAGAAGAACCCTCTTGTGTTTCTAGACGTCTCAATTGATGGGGATCTTGTGGAACGAGTTGTTATAGAGCTTTTCGCCAGTATTGTTCCCAAGACAGCTGAAAATTTCCGGGCACTTTGTACAGGTGAGAAGGGCATTGGAAAATCAACCGGAAAACCTTTGCATTATAAAGGAACTTGTTTTCATCGTATAATTAAAGGATTCATGGCCCAAGGTGGTGACTTTTCAAGGGGAAATGGAACTGGTGGAGAAAGTATATATGGAGGAAAGTTTGCTGATGAAAATTTCATATTAAAGCATGACGGACCTGGTCTTCTATCCATGGCTAATGGTGGCCCAAACACAAATGGTTCCCAATTCTTTATTACCTTCAAGCGCCAACCACATCTTGATGGGAAACATGTCGTTTTTGGAAAAGTTGTTGGTGGATTAGATCTTCTGAAGAAAATTGAACTGGTGGGGACATCAGATGGGAAACCTGTTCGGCCTGTTAAAATCATTGATTGTGGTGAAGCAACTGAAGCGAAAATTCAGCCGAAAATTGGGAAAGAGAAAGGTACTTGA 573 0.4119 MSQKKNPLVFLDVSIDGDLVERVVIELFASIVPKTAENFRALCTGEKGIGKSTGKPLHYKGTCFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFILKHDGPGLLSMANGGPNTNGSQFFITFKRQPHLDGKHVVFGKVVGGLDLLKKIELVGTSDGKPVRPVKIIDCGEATEAKIQPKIGKEKGT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2390 190 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Prci1g2390 190 CDD cyclophilin_ABH_like 7 173 - -
Prci1g2390 190 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Prci1g2390 190 PIRSF Peptidylpro_ismrse 1 180 IPR024936 GO:0003755
Prci1g2390 190 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Prci1g2390 190 Gene3D - 1 181 IPR029000 -
Prci1g2390 190 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Prci1g2390 190 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Prci1g2390 190 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Prci1g2390 190 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Prci1g2390 190 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Prci1g2390 190 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Prci1g2390 190 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Prci1g2390 190 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2390 Prci-Chr1 44154515 44159589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2390 25 173 U-box Gene Family AT5G67530 48.344 2.51e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2390 K09566 - qsa:O6P43_006974 335.88