Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2365 ATGGAGGAGTGCGGTCCGCGAGTGGCCATTCCACCGCCTCAACCATTCGTCAAGTCATTCATGTACTCTCTTAAAGAGACTTTTTTTCCGGACGACCCTTTCAGCCAATTCAAAAACCAGCCACCTTCCAGAAAACTTCTTCTCGGCCTCCAGTACTTCTTCCCTGTCCTCGAATGGTTACCTCGCTACACTCTCAGCTTCTTCAAATCAGACATCATTGCCGGCATCACCATCGCCAGCTTGGCTATTCCTCAAGGCATCAGTTACGCCAAACTCGCCAACCTCCCTCCAATTCTTGGGCTGTATTCCAGCTTCATACCGCCATTGATTTATGCGATGATGGGAAGTTCGAGGGATTTGGCGGTGGGAACAGTGGCGGTTGGGTCGCTTTTGCTGGGCTCCATGCTGGCTAGATCGGTCAATCCCAACGTCGACTCCAGGCTCTTCCTTCACCTTGCTTTCACTGCTACATTCTTCGCCGGGGTTTTGCAAGCTTCACTGGGTTTGTTTAGGTTAGGTTTTATTGTGGATTTTCTGTCACATGCATCAATAGTAGGGTTCATGGGAGGAGCAGCAACAGTGGTTTGCCTGCAACAGCTGAAATCGATTCTGGGACTGGAGCATTTTACCCATGACGCCGATCTTGTCTCTGTGATGCGATCCGTTTTTAGCCAAACACACGAGTGGAGATGGGAAAGCGCTGTGTTAGGGTGCTGCTTCATTTTCTTCTTGCTCCTCACCCGGTACTTCAGCAAACGACGACCGAAGTTCTTTTGGGTGTCAGCAATGGCGCCGTTGACGTCCGTGATCCTGGGAAGTCTGCTTGTTTATTTTACTCAAGCCGAGAAGCACGGCGTTCAAGTGATCGGAGAGCTGAAGAAGGGATTAAATCCCCCTTCCTTCAAAGATCTGGTATTTGTGTCGCCTTATATGACCACAGCTGTTAGAGCTGTTGTCACGGGCATCATAGCCCTCGCCGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTCAAGAACTACCATATCGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATAGTTGGTTCTTTTACCTCCTGCTACCTCACAACAGGGCCATTTTCGCGGACGGCTGTGAACTACAATGCGGGATGCAAGACTGCAGTATCAAACATTGTGATGGCAATAGCAGTGATGATGACATTGTTATTCTTGACGCCCTTGTTCTATTACACTCCACTGGTGGTGCTCTCGGCCATCATTGTGTCAGCAATGCTGGGCCTTATAGATTACGAAGCAGCCATGCATCTTTGGAAGATTGACAAGTTTGACTTCCTAGTATGCATCAGTGCTTACGTTGGTGTCGTCTTTGGCAGTGTCGAAATTGGCCTTGTCATAGCCGTATTCATATCTGTGCTTAGGGTTCTCTTGTTTGTTGCAAGGCCAAGGACGTTTGTTTTAGGCAACATTCCAAATTCTGTCGTGTACAGAAATGTTGAACAGTATCCAAATGCCAACCATGTTCCTGGAATACTAATTCTAGAGATTGATTCCCCGATCTACTTTGCCAATGCAAGTTATTTGAGAGAGAGGATCACGAGGTGGATTGATGAAGAGGAAGGCAGGGTTAAAGCCACAGGGGAAGCCAGTTTGCAGAGTGTGATACTAGATATGACTACCATTGGGAACATTGATACGAGTGGAATAAGCATGCTTGAAGAGGTGAAGAAGATTGCAGATAGAAGAGGGCTGCAGCTTGTTCTGGTCAATCCTGGAAGTGAAGTGATGAAGAAGCTCAATAAAGCCATGTTCATTGAGACTATAGGTCAGAAATGGGTCTTCCTGACAGTTGAAGAGGCTGTTAGAGCATGCAACTACATGCTTATGCTTCGTGCAAAACCTCATCCCAAGAAAGATGAATCCGAGGCTTGGAACAATGTCTAG 1935 0.4724 MEECGPRVAIPPPQPFVKSFMYSLKETFFPDDPFSQFKNQPPSRKLLLGLQYFFPVLEWLPRYTLSFFKSDIIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLLGSMLARSVNPNVDSRLFLHLAFTATFFAGVLQASLGLFRLGFIVDFLSHASIVGFMGGAATVVCLQQLKSILGLEHFTHDADLVSVMRSVFSQTHEWRWESAVLGCCFIFFLLLTRYFSKRRPKFFWVSAMAPLTSVILGSLLVYFTQAEKHGVQVIGELKKGLNPPSFKDLVFVSPYMTTAVRAGXVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRTAVNYNAGCKTAVSNIVMAIAVMMTLLFLTPLFYYTPLVVLSAIIVSAMLGLIDYEAAMHLWKIDKFDFLVCISAYVGVVFGSVEIGLVIAVFISVLRVLLFVARPRTFVLGNIPNSVVYRNVEQYPNANHVPGILILEIDSPIYFANASYLRERITRWIDEEEGRVKATGEASLQSVILDMTTIGNIDTSGISMLEEVKKIADRRGLQLVLVNPGSEVMKKLNKAMFIETIGQKWVFLTVEEAVRACNYMLMLRAKPHPKKDESEAWNNV 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2365 645 ProSitePatterns SLC26A transporters signature. 97 118 IPR018045 GO:0008271|GO:0008272
Prci1g2365 645 Gene3D STAS domain 479 625 IPR036513 -
Prci1g2365 645 Pfam Sulfate permease family 68 448 IPR011547 GO:0016020
Prci1g2365 645 ProSiteProfiles STAS domain profile. 499 622 IPR002645 -
Prci1g2365 645 SUPERFAMILY SpoIIaa-like 502 622 IPR036513 -
Prci1g2365 645 PANTHER SULFATE TRANSPORTER 18 622 IPR001902 GO:0016020|GO:0055085
Prci1g2365 645 FunFam Sulfate transporter 31 479 625 - -
Prci1g2365 645 Pfam STAS domain 500 618 IPR002645 -
Prci1g2365 645 NCBIfam sulfate permease 55 618 IPR001902 GO:0016020|GO:0055085
Prci1g2365 645 CDD STAS_SulP_like_sulfate_transporter 500 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2365 Prci-Chr1 43949599 43954956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2365 7 645 Inorganic Solute Cotransporters AT4G02700 66.719 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2365 K17471 - gmx:100791091 1090.1