LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g2363	ATGGCCGAGAAATTGAATGACACCGTGGAAGACGACGCTGTGGAAAAACCTGACTCGAAAGAAAAGAAGTTGTCTTCAAAGGTGAAGGAAAAGAGTGCAAGCTTCAACGATCGAGGAATATGTGTGAGAGCGGACAAGATTGATTTCAAGGATTGGGATTGTCAGCTGGACAAGCACTTGAATAAGGTTTTGTCGAGAGAGGCAACGCGGAAGAGGAAGGAAGACTGGGAGATCGATTCCTCCAAATTGGACATACGGCGTGCTATCGATCACGGAGCCTATGGAACAGTCTACCGTGGCGTTTATGACGGCCAAGACGTTGCTGTGAAGGTATTTGATTGGAGGGACACTGACAAGGAAGCAGCCGCTATTCGGGCATCGTTTCAGCAAGAGGTTGCTGCTTGGCATAAGCTTAACCATCCAAATGTCACAAAGTTTGTTGGAGCTTCCATTGGGAACTCGTTTGTGAAAATTTCTTCTGAAGACATATCAAATGAAGTTTATTCATTTATTCCGGCCCAGGCCTGTTGTGTTCTTGAGTTTGTTCCTGGAGGGACGCTGAAGAAGTTTCTGATGAAGAACAGAAGGAAGAAACTGGATTTTGATGTTGCAATCCAACTTGCTTTGGACCTCTCCAGAGGTTTGAGTTATCTTCACTCAAAGAAGATTGTGCACCGGGACGTGAAGACAGAAAATATTTTATTGGATGCAAACGGAACTGCGAAAATTGCTGATTTTGGCGTTGCTCGAATTGAGGCTCTGAACCCATGTGAAATGACTGGGGGGGTTGGAACCCCTTGCTACATGGCACCAGAGGTGCTTAATGGTAAGCCTTACAATAAGAAATGTGACGTCTACAGCTTTGGGATATGCTTGTGGGAGATATATTGCTGTGACTTGCCTTATCCTACTCACAAGTTTTCTGACGTATTTACTGGAGTTGTCCGACAGAATTTGCGACCAGAAATCCCAAGATGTTGCCCAAGTTCACTGTCGAGAATCATGCGAAAATGTTGGGATGAAGACCCGGACAAGCGTCCTCAGATGGAGGAAGTGGTGAGAATGTTGGAGGCAATAGATACAAGCAAGGGAAGACGCATGATTTCAAAGGACCAATCTAGTTTTTGGTGTTTTTGTCCTGGTGGAGTCCTTTAA	1155	0.4519	MAEKLNDTVEDDAVEKPDSKEKKLSSKVKEKSASFNDRGICVRADKIDFKDWDCQLDKHLNKVLSREATRKRKEDWEIDSSKLDIRRAIDHGAYGTVYRGVYDGQDVAVKVFDWRDTDKEAAAIRASFQQEVAAWHKLNHPNVTKFVGASIGNSFVKISSEDISNEVYSFIPAQACCVLEFVPGGTLKKFLMKNRRKKLDFDVAIQLALDLSRGLSYLHSKKIVHRDVKTENILLDANGTAKIADFGVARIEALNPCEMTGGVGTPCYMAPEVLNGKPYNKKCDVYSFGICLWEIYCCDLPYPTHKFSDVFTGVVRQNLRPEIPRCCPSSLSRIMRKCWDEDPDKRPQMEEVVRMLEAIDTSKGRRMISKDQSSFWCFCPGGVL	384

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g2363	384	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	223	235	IPR008271	GO:0004672\|GO:0006468
	Prci1g2363	384	Pfam	Protein tyrosine and serine/threonine kinase	84	356	IPR001245	GO:0004672\|GO:0006468
	Prci1g2363	384	Gene3D	Transferase(Phosphotransferase) domain 1	184	375	-	-
	Prci1g2363	384	PRINTS	Tyrosine kinase catalytic domain signature	179	192	IPR001245	GO:0004672\|GO:0006468
	Prci1g2363	384	PRINTS	Tyrosine kinase catalytic domain signature	283	305	IPR001245	GO:0004672\|GO:0006468
	Prci1g2363	384	PRINTS	Tyrosine kinase catalytic domain signature	217	235	IPR001245	GO:0004672\|GO:0006468
	Prci1g2363	384	PRINTS	Tyrosine kinase catalytic domain signature	327	349	IPR001245	GO:0004672\|GO:0006468
	Prci1g2363	384	CDD	STKc_MAP3K-like	89	356	-	-
	Prci1g2363	384	SUPERFAMILY	Protein kinase-like (PK-like)	65	356	IPR011009	-
	Prci1g2363	384	MobiDBLite	consensus disorder prediction	1	32	-	-
	Prci1g2363	384	FunFam	Kinase suppressor of Ras 1	72	163	-	-
	Prci1g2363	384	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	61	363	-	-
	Prci1g2363	384	SMART	serkin_6	83	359	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g2363	384	Gene3D	Phosphorylase Kinase; domain 1	72	161	-	-
	Prci1g2363	384	ProSiteProfiles	Protein kinase domain profile.	83	359	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g2363	Prci-Chr1	43930214	43933059	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g2363	15	379	MAP Kinase Kinase Kinase	AT3G22750	61.022	5.19e-164	462

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Prci1g2363		PK_Tyr_Ser-Thr	1.4e-59	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g2363	-		-	qsa:O6P43_006999	518.464