Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2341 ATGCTGGACACAATAGGAAGAAATCTGAACCAGTGCTTCTCCAAGCTTATGCGGCCATTAATATCACCTGAAGCTTCGTCTTCTTCTTCCGGCAGCACTCATCAAGACGACCCTGCTGTTTCACCCGCTACGACATCGTCTCCTGTGTTTGTTAAAAACTTCAACTCGCTGTATGACTCGGCCTCGGATTTTTCCAACGCCGGCAATGAACCAGACCTGGCTACCGCCTTCGCCTCCCGACGCTTCTTCTTCTCTTCTCCCGGCCGCTCTAACTCCATCGTGGAATCCTCCGCCGCCGCCGGTCAGAACAGGAAAGTCTTCAATAACAGTGTAGCCGTTCCCACCTTCTCGCCGGACCCTTATGTGGACTTCCGACGGTCCATGCAGGAGATGGTGGAGGCGCGTCCGGAGCTGATGGATGTTAACTCCAACTGGGAAATCTTGCACGAGCTTCTCCTCTGCTATCTTGCTCTCAACCCCAAACACACCCACAAGTACATCGTGGGTGCTTTCGCTGATCTTCTCGTCAACCTCATGCCGTCGCCGCCTCCTGACTCCACCGATGGCATCATCACCGACGTCGTGGGTGCCACCTAA 597 0.5444 MLDTIGRNLNQCFSKLMRPLISPEASSSSSGSTHQDDPAVSPATTSSPVFVKNFNSLYDSASDFSNAGNEPDLATAFASRRFFFSSPGRSNSIVESSAAAGQNRKVFNNSVAVPTFSPDPYVDFRRSMQEMVEARPELMDVNSNWEILHELLLCYLALNPKHTHKYIVGAFADLLVNLMPSPPPDSTDGIITDVVGAT 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2341 198 ProSiteProfiles OVATE domain profile. 113 177 IPR006458 -
Prci1g2341 198 NCBIfam uncharacterized plant-specific domain TIGR01568 111 179 IPR006458 -
Prci1g2341 198 MobiDBLite consensus disorder prediction 23 45 - -
Prci1g2341 198 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 46 178 IPR038933 GO:0045892
Prci1g2341 198 Pfam Transcriptional repressor, ovate 117 178 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2341 Prci-Chr1 43786488 43787661 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Prci1g2341 Ovate 8.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2341 - - pcin:129295641 372.089