Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2339 ATGGAGGTTTCTGTTCTGAAGGGTGGGGTTTTGGCGCATGAAAAAGAGGCATTAAACTTGACAATTCAGGACGATCAATTGAAGCCTGTTGTACAACAAGAAGGGGTCTTCGACAGGGATTCGAATGACAGTGAAAATATTAGGATAGCGGAAAATGGGAACAAGAGGAGTAGTTTAAGCTGTGATGATATCGTTGAAGGAGTTGACATTGGGATGGAGGTGAAGAAAAAAGATGATTTGAACGATCATGTGCAGATTGGTGGCCGAGCATTGTCCTCAGTGTCGGAGGAAAAAGACAAGATGTCTGATGGTCGAGAGGCACTGAACTTAACAGTTGAGAATAAGAATGCGGAACCAATTGTGCAACAAGAATGTGACTTAAATTGGGATATGAGTGAGGGTGGTAATGGGGGGTTTGTCAAGGATGGGAGCAAAATTAGTAGTTTAAGCTGTGATGGTAACATTGGAGGGGTTAACATTGAGGTCGAGGTGAAGAAGAAATATTATTTAAATGATAAAGTGCACATTGGTGGTCGAGTATTGCGCTCAATGTCAAATAGAGCAGTCAGTAAAATATCCGACGGAGAGGCATCAAACTTCACAGCTGAGAATGAGGAAGTGAAGCCAATCAATCAACAACCACGTGACTTAGATGGGGATGTGAGCAAGAGTGGAAATGTTGGATTGGCTAAGACTAGTTATAAAAGGAATGGTTTAAGGTCTGACGGTTACTTTGAAGGGCTTGATGATGAGATGGAGTTGAAGAAATTTAATGCAAATGATAAAGTGAAGACTAGTGGCCGAGTATTGCGCTCAATGTCAAAGACAGTAGACAAAAAGATATTTCACGGTGGAGAAGCTGATGAGGTGTTGGTTGGGAAACATAGAGAGAATGAACATGATTGGTTTGAGAAAAATAAGGTTAAGGTAGAAAAAGAAGAAGGTGATGATTTTGTTAGTAGCAGTTATGAGAAGGAGGGAGTTCATGTGAAAATAGATGGCAATGAAAGAAGGGAGTTGAAACGAAAACGTGGCAGGCCCCCTAAATTGAAGATGGAAGAGCAAAATCAATCAGTTGGTACTTTGCAACAGAAATGTGGTGGTCCGCCCAAATTGAAGATTGAAGAGCAAGGCCAATTACATGGCAACATGCAACGGAAGCGTGGAAGGCCCCCCAAAGTGAAGATGGAAGAGAAAGATCAACTAGTTGGTAATATGCAACAGAAGCGTGGAAGGCCACCCAAAGCAAAGATGGAAGAGCAAGATCAACTAGTTGGTAATATGCAACGGAAGCGTGGAAGGCCGCCCAAAATGAAGACAGAAGGGCAAGATCAAAATCCTGGCAAAAAATTGAAAAGGAAGCGTGGAAGGCCTCCCAAAATTGAGCAGAAAATTAATCAGATGGAAGTAGTACAAGACAGAAAAGGAAAGGCAGGCTTTCAAAAAGGTAACAAAAGTATAACTGTGAGAGATGATATGCATATGAATGCAGTTGGTGATATGTGCTTGAAAGGGAGACTTCGTGTGAAAGAATTAAAAAAGGAGAGATTTTCTTTTGTTAGGAAGAATGAATGTGGGAGTATTTTGAAAACCAAGAATTGTACATTTACTTCACCATTGATATCAAAGTCTGTGAATCCTCCCATTGAGAAGAAAAAAGGAATGAATAAAGCAAAACAGTCAGTGAGGCAACACATCTTGGAGCTGCTCTTGGCTGCTGGCTGGGTTGTTGATTACAGACCTAGGAACGGCAAAGAGTATAATGATGCAGTGTACGTTAGTCCAGATGGAAAGACTCACTGGTCAATTACCTTGGCCTACAAAAGGCTTCAGCAGCATTTTGAAGCTGGTGATGGTGAAGGTGAGGTATACATTCCAGGTTTCAAATTTGTGCCCATACCATTGGAGGAATTCAATATTCTAACTAAGGTCGTCAAAAAGAAAAGGGGAGATAAAGGTAAACTGAAGAAAAAAAAGGTGAAGAAAGAACAATTAGGTTCTTTTGGAGGCTCAAATAAGTCATCAAAGGGGAAAGTGAATAGAAAAATGTCATTTGTTGAGGAGGACAGTCTAGATGTTTTTTCGCATAGAAGGTTTCCAATTCTGGTCAAGGATCGTAAATGGCAGAAAATACACAAAAAGAGGCGTAGTGTTTTTATGGTTCGCAATGCTGAGGAGATAGATTCAGAAACAAATGGGTATGTACTTTACACTGGAAAGCGAACTGTGCTTGCTTGGATGATGGATTTGGGTACAGTCCTGCAAAATGAGAAGGTTCATTGTGTGAACCACAGAAGGGAAGGTGCAAAACTGGAGGGAAGGATCACAAGAGATGGAATTCATTGTGAATGCTGCAATGAAATTATAACAATTTCAGAATTTGAAGTCCATGCAGGAAACACACTCTCTGCTGATCCACTCAAAAATATACATACAGAGAGAGGAATTTCTCTTCTGCAATGCCTGCTTGACTCATGGAATAAACAGGATGAACAAGAAAGAAAAGGCTTCCATTTTATTGACACCACAAGTGAAGACCCTAATGATGATGCTTGTGGTGTCTGTGGAGATGGTGGAGACTTGATCTGTTGTGATAATTGCCCATCAACATTCCATCAAAGCTGCCTAAATATTGAAGAGTTCCCGCCTGGAAACTGGCACTGTGTTTATTGTTGTTGCAAATTCTGTGAGTTGGTTGATGGAAGTACAAATGAAAGAGATGGCTATGATGACTTTACCACATCTGCTTTACTTACATGCCGTTTATGCGATCAAAAATATCATAGATCTTGTGTTGAGGTAAATGGTGTCGCAGCTGATGACTCTACTTTTGCATTCTATTGTGGAAACAGATGTGAAGAGATATCCAAGAGACTTGAAATGCTTCTTGGGGTTAAACATGACCTTGAAGATGGACTTTCTTGGACTTTCATTCGCCGGTCAGATGTTGGCAATGATACTTCTCAAATAAAATCCCAGATGGTCGAATGCAATTCCAAGCTAGCTGTGGCATTATCTGTAATGGATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGGAGTAATCTCATCCATAGTATTCTTTATAATTGTGGTTCAAACTTCAATCGCCTGAACTATAGTGGTTTCATTACTGCTATCCTGGAGAGAGGTGATGAGGTCATCGGCGCAGCATCTATTAGGATCCGAGGGAACCAACTGGCAGAAATGCCATTCATTGGGACCCGCTATATGTATAGGCGCCAAGGAATGTGCCGCCGGCTTCTAAGTGCCATTGAATTGGCACTTAGCTCTTTACATGTTGAGTCGTTGGTTATACCAGCAGTCTCTGAAGTCAGAGATACTTGGACTTCTGTTTTTGGGTTTGAGCCGCTTGAAGCGACCAGGAGGCAGATGATAAAGAATTTCAATCTGTTGGTATTCCCTCATGTAGATATGTTAATGAAAGAGATAAAGAAGCCTGAAGTTGCTGCTAAAGGTCTGATCCCTATAGAAGTTTCGAAACTTCAGAAGAATCAAAATACAGCTGATAAAGCGACTGACTGTGATGAGCCAAGTTCATTTAGGTCTGATTTGATCATTTCTGCTGGGAGTGGAATCCCTGCGTTGGATGTTTGCCCAGTAAATGACAGACACGCGTCTGCTGAATCTGGTTCTCGTGATGGCTTATTGAATAATCCACCACATCACATTACCAGCGAGACAGTAGGATCGAAAGAAATCAATTCTGAATCTATCAATGGCTGTGGTTCTCAGCGGAGACCCGGAGGTCATTGTGCCCCTGATGAAGTGAATCTCGAGATTCTAAAAGCTGAAAAATCAGACGCACGTGCTGCTAAAGCAGCCTGTCTTCATAGTCTCGTACTTTCTGGAGATTGCCAATCAGTACAGATAGCTTCAGGATCCTGTGAGGACATGGCAGATGGTGTAAATGAGAGAAGTGAAGCAGTCGGCATAGCAGAGGGGAATTCTGATCTCAATGATAAACCTGGTATAAATCGTTCTTCGGAGGTATCTGAGCTTGATTTACAGGTCAATCAAACTGGACAGGGACAGGGTGACACAAACACTGGTTGCGGCATGTCTCTTCACTGTGCGTCAGCTGGTGGTACTTCGTGTGGCAAAAGTAATACTGAAGTTATAGTTGTGTCCGACGAAGCCAGTTGA 4170 0.4173 MEVSVLKGGVLAHEKEALNLTIQDDQLKPVVQQEGVFDRDSNDSENIRIAENGNKRSSLSCDDIVEGVDIGMEVKKKDDLNDHVQIGGRALSSVSEEKDKMSDGREALNLTVENKNAEPIVQQECDLNWDMSEGGNGGFVKDGSKISSLSCDGNIGGVNIEVEVKKKYYLNDKVHIGGRVLRSMSNRAVSKISDGEASNFTAENEEVKPINQQPRDLDGDVSKSGNVGLAKTSYKRNGLRSDGYFEGLDDEMELKKFNANDKVKTSGRVLRSMSKTVDKKIFHGGEADEVLVGKHRENEHDWFEKNKVKVEKEEGDDFVSSSYEKEGVHVKIDGNERRELKRKRGRPPKLKMEEQNQSVGTLQQKCGGPPKLKIEEQGQLHGNMQRKRGRPPKVKMEEKDQLVGNMQQKRGRPPKAKMEEQDQLVGNMQRKRGRPPKMKTEGQDQNPGKKLKRKRGRPPKIEQKINQMEVVQDRKGKAGFQKGNKSITVRDDMHMNAVGDMCLKGRLRVKELKKERFSFVRKNECGSILKTKNCTFTSPLISKSVNPPIEKKKGMNKAKQSVRQHILELLLAAGWVVDYRPRNGKEYNDAVYVSPDGKTHWSITLAYKRLQQHFEAGDGEGEVYIPGFKFVPIPLEEFNILTKVVKKKRGDKGKLKKKKVKKEQLGSFGGSNKSSKGKVNRKMSFVEEDSLDVFSHRRFPILVKDRKWQKIHKKRRSVFMVRNAEEIDSETNGYVLYTGKRTVLAWMMDLGTVLQNEKVHCVNHRREGAKLEGRITRDGIHCECCNEIITISEFEVHAGNTLSADPLKNIHTERGISLLQCLLDSWNKQDEQERKGFHFIDTTSEDPNDDACGVCGDGGDLICCDNCPSTFHQSCLNIEEFPPGNWHCVYCCCKFCELVDGSTNERDGYDDFTTSALLTCRLCDQKYHRSCVEVNGVAADDSTFAFYCGNRCEEISKRLEMLLGVKHDLEDGLSWTFIRRSDVGNDTSQIKSQMVECNSKLAVALSVMDECFMPYIDHRSGSNLIHSILYNCGSNFNRLNYSGFITAILERGDEVIGAASIRIRGNQLAEMPFIGTRYMYRRQGMCRRLLSAIELALSSLHVESLVIPAVSEVRDTWTSVFGFEPLEATRRQMIKNFNLLVFPHVDMLMKEIKKPEVAAKGLIPIEVSKLQKNQNTADKATDCDEPSSFRSDLIISAGSGIPALDVCPVNDRHASAESGSRDGLLNNPPHHITSETVGSKEINSESINGCGSQRRPGGHCAPDEVNLEILKAEKSDARAAKAACLHSLVLSGDCQSVQIASGSCEDMADGVNERSEAVGIAEGNSDLNDKPGINRSSEVSELDLQVNQTGQGQGDTNTGCGMSLHCASAGGTSCGKSNTEVIVVSDEAS 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2339 1389 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 992 1152 IPR000182 GO:0016747
Prci1g2339 1389 SMART AT_hook_2 452 464 IPR017956 GO:0003677
Prci1g2339 1389 SMART AT_hook_2 407 419 IPR017956 GO:0003677
Prci1g2339 1389 SMART AT_hook_2 385 397 IPR017956 GO:0003677
Prci1g2339 1389 SMART AT_hook_2 341 353 IPR017956 GO:0003677
Prci1g2339 1389 SMART AT_hook_2 429 441 IPR017956 GO:0003677
Prci1g2339 1389 MobiDBLite consensus disorder prediction 390 405 - -
Prci1g2339 1389 MobiDBLite consensus disorder prediction 329 351 - -
Prci1g2339 1389 MobiDBLite consensus disorder prediction 434 449 - -
Prci1g2339 1389 PANTHER PHD FINGER PROTEIN 12 551 1233 IPR042163 GO:0003714|GO:0045892
Prci1g2339 1389 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1042 1126 IPR016181 -
Prci1g2339 1389 Pfam Tify domain binding domain 773 823 IPR032308 -
Prci1g2339 1389 MobiDBLite consensus disorder prediction 652 679 - -
Prci1g2339 1389 CDD NAT_SF 1048 1107 - -
Prci1g2339 1389 CDD PHD4_NSD 852 891 - -
Prci1g2339 1389 MobiDBLite consensus disorder prediction 329 461 - -
Prci1g2339 1389 ProSiteProfiles Zinc finger PHD-type profile. 849 894 IPR019787 -
Prci1g2339 1389 SMART PHD_3 851 892 IPR001965 -
Prci1g2339 1389 SMART PHD_3 893 953 IPR001965 -
Prci1g2339 1389 MobiDBLite consensus disorder prediction 412 427 - -
Prci1g2339 1389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 840 908 IPR013083 -
Prci1g2339 1389 PRINTS AT-hook-like domain signature 427 438 IPR017956 GO:0003677
Prci1g2339 1389 PRINTS AT-hook-like domain signature 450 460 IPR017956 GO:0003677
Prci1g2339 1389 PRINTS AT-hook-like domain signature 341 351 IPR017956 GO:0003677
Prci1g2339 1389 SUPERFAMILY FYVE/PHD zinc finger 843 897 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2339 Prci-Chr1 43775163 43784644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2339 311 1158 PHD Transcription Factor Family AT5G36670 37.717 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2339 - - pcin:129313417 2714.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2339 1 43775163 43784644 Prci1g2339 1 43775163 43784644 ECH