Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2293 ATGGCGAGAAGCTCAGGATTATGCGGATACAGAGAACAGAGGAAGAGAATTGGTGGAGTTCCACTCTTGAACTCCAAGAAGAGAAAAGAAACCTTGTTTAGAAAATGTCATGAGCTTACTGTGAAGAGCGACGCTCGCGTGAGTTTAGTGTGCATTGGGCCTAATGGAGAAATTGAGACATGGCCAAATCATGAGATAGTGAAGGCCGTGCTCAGGAAGCACAGAGAAAAGCAAGCTGATGAGAAGATGAAGAATGGCGGCATTAAGAAGGACAAACACTCGCACGTGTCGGAATCAGAGGAAAAGAAGAAACCAACGAACGATTCGGCGGGGAAGCTTTCTGCAGAGTCACTGATGACTCTACTGAGGGAATTGGACTCGAAACTGGAAACTGTGGATGAGAAAATCAAGATGCTGAGTACCCAAAAAGCCACTCATTTCTGTGCTGGTGCGAATAATTCTGAGAGCTTCTTGGAGGTTTGTGAATATCGGGATGATCTGTCAACACACAAGATAGAATCATACGGCCAACCTACGGTTTCTTCTGTACAACCAAATCAGCCAACCCAATTTACAGAAGAATCGCTGGCTGTTACTGCTGATACAGATTGTTCATTTATGAGCAGTATCGGCAACAAGAGTCTGTGGGTTCCGCAGAATACTGATAATTTCGTGCCGAACCATATTTGGGAGCCAGAAATAGAATTGCTTTGTACTTGTATGAATGGGGCACAACCCTCGACGGGGAATGGAAGAGATGATATCGGAGCATTGCGGAATTACTATACGGGAAGCGATTGGAATCACCTGCTTCAGTGGTGA 822 0.4526 MARSSGLCGYREQRKRIGGVPLLNSKKRKETLFRKCHELTVKSDARVSLVCIGPNGEIETWPNHEIVKAVLRKHREKQADEKMKNGGIKKDKHSHVSESEEKKKPTNDSAGKLSAESLMTLLRELDSKLETVDEKIKMLSTQKATHFCAGANNSESFLEVCEYRDDLSTHKIESYGQPTVSSVQPNQPTQFTEESLAVTADTDCSFMSSIGNKSLWVPQNTDNFVPNHIWEPEIELLCTCMNGAQPSTGNGRDDIGALRNYYTGSDWNHLLQW 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2293 273 MobiDBLite consensus disorder prediction 76 109 - -
Prci1g2293 273 SUPERFAMILY SRF-like 26 79 IPR036879 GO:0003677|GO:0046983
Prci1g2293 273 ProSiteProfiles MADS-box domain profile. 27 65 IPR002100 GO:0003677|GO:0046983
Prci1g2293 273 MobiDBLite consensus disorder prediction 76 114 - -
Prci1g2293 273 Gene3D - 26 108 IPR036879 GO:0003677|GO:0046983
Prci1g2293 273 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 26 61 IPR002100 GO:0003677|GO:0046983
Prci1g2293 273 Coils Coil 115 142 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2293 27 76 MADS-box Gene Family AT3G18650 45.098 1.16e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Prci1g2293 SRF-TF 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2293 - - pcin:129301898 563.918