Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2272 ATGGACACTCAAGCAGACCCTCCTGAAACGCCAGCCAAAAGGCACAAGTGCTCAGCATGCTATAGGCAATACAAGAAAAAGGAACATCTTATTGAGCACATGAAGATCTCATACCACTCAGTCCATCAGCCTAAATGTGGGGTCTGTCAAAAGCACTGCAAATCTTTTGAATCTCTGAGGGAACACCTTACTGGTCCATTGCCGAAAGGAAATTGTTCCAATTTTTTCTCTCAACATGGTTGTCAACTTTGCTTAAAATTATTTGATAGCCCCGCAGCTCTTATCGAGCATAAAGAAACATGTTATCTATCTGCACCAACTCCTCTGGGAACAGAGGCATTGGCCTATATAAGATCCCCAATACTTCGTCCAAATTCTCCTCATGAAAACCACACTGGAAGGCGCCCTGGAGCAATTGCCATTGATTGTGAAATGGTTGGTGGTGGAAGTGATGGATCATTAGACCTTTGTGCTAGAGTATGCATGGTTGATGAAGATGAGAATTTAATTTTCCACACCTATGTACAGCCTCAAATCCCGGTTACTAACTATAGATATGATATAACTGGGTTGACAGAAGAGCATCTTAGAGATGCCATGCCACTTAAGGAAGTTCAAGACAAGGTATTGCAAATTCTGTACAATGGAGAATCAATTGGCAAAGTTAGATTGGATGGAGGAAAGGCCAAGCTTCTTGTGGGGCATGACCTAGAACATGATTTGGACTGCCTAAAATTGAATTATCCTGATCATATGTTGAGGGACACTGCAAAGTATCGTCCGTTGATGAAAACAAACTTGGTCAGCCATTCGCTCAAGTACCTTACTCGAACGTATTTAGGTTATGACATCCAGACAGGCACACATGACCCCTATGAAGACTGTGTTTCCGTGATGAGGCTGTACAAGAGAATCCGAAGCCAAGTTCATACCGAGGAAAACCTCGGAACATTTACTTCAAGTAACGTCACTGGCAATTCTGATTATTGGAAATCCAAGGAACTTGAGAACTCTACAGCAGATGAGCTCTTTGCCATGTCCAAATCAGACTATAGGTGTTGGTGCTTGGATTCGATGTAG 1080 0.4259 MDTQADPPETPAKRHKCSACYRQYKKKEHLIEHMKISYHSVHQPKCGVCQKHCKSFESLREHLTGPLPKGNCSNFFSQHGCQLCLKLFDSPAALIEHKETCYLSAPTPLGTEALAYIRSPILRPNSPHENHTGRRPGAIAIDCEMVGGGSDGSLDLCARVCMVDEDENLIFHTYVQPQIPVTNYRYDITGLTEEHLRDAMPLKEVQDKVLQILYNGESIGKVRLDGGKAKLLVGHDLEHDLDCLKLNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQTGTHDPYEDCVSVMRLYKRIRSQVHTEENLGTFTSSNVTGNSDYWKSKELENSTADELFAMSKSDYRCWCLDSM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2272 359 SMART exoiiiendus 137 311 IPR013520 -
Prci1g2272 359 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Prci1g2272 359 Gene3D Classic Zinc Finger 2 65 - -
Prci1g2272 359 CDD REX4_like 139 303 IPR037431 GO:0006364|GO:0008408
Prci1g2272 359 SUPERFAMILY Ribonuclease H-like 139 306 IPR012337 -
Prci1g2272 359 Gene3D - 135 320 IPR036397 GO:0003676
Prci1g2272 359 Pfam Exonuclease 139 302 IPR013520 -
Prci1g2272 359 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Prci1g2272 359 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 18 309 IPR047021 GO:0004527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2272 Prci-Chr1 43319285 43324216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2272 1 359 C2H2 Transcription Factor Family AT3G27970 53.760 1.00e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2272 K18327 - gmx:100788682 600.512