Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2260 ATGTCCCTCTTTCCCCTCTTCTTCTTCTCTGTTTTCCTCGCTTTCCCCCTTTCTTCCCTCTCCGCTAACGACACCGGTCTCAATGCCCCGTGCCCTCTCAACTTCACCGTCCTCAACGCTGTCGCCGGCGGTGACCGGCCCTCTGTCGACTCCGGCACTGTCTGCGAGTTCTCCCGCTCCGCCATCCGTCTCGTTCAATCCGATTACCTCCGTCGCACCGGCTCCTTCCTTCCGCCTCTCAACTCTTCCGAGACTTGCTGGGATGATTTCCAGAAGTTCATCAATCAATACCTTCCCAACCTAGACGTTCGCTCCGCTTGTGGCTTCCAGACAACCTGGATCTCCCAGGGCTGTCAGAACATCACCACTAAAGATGAATTCATCTCCCAGATTCCCGACTCGGTTATTCAGGATGTCCGGCAGAAATGCAATCAGTCGCTCGAGAATAACTCCCCCTGCGCCCTCTGCACCACGAGCTTATCGGGCATGCAACCCTTCGTGAAAGGAACCTCGGTTGGGAACGTCTCCGATTGTACGGCCTATCCCCCAATTTACGCCGCCGCCTATGTCAACCAGGCTGGACCCGCCGACAGAGGCACTGCCCAGTGCGTGTTCCTTCTGAGTTTCAACTCGCCAGGTTCCAACGGTAATAAACGAACGATTATTATTGTGGCGGTCGTGATTGTTTGTGTGTTGGCTTTGTTTCTGGTGGTTGCGGGGCTTTGGCTTCACCGGAGATCCAAGGGGAAGGGCATGAAGGGTATTAGTAAAACTGAGATGGCGGTCGTGTCGGGGTTGGATTCTATAAAGGAGAGCACCACTTTGATTAGGTTTACATTTGATGACATCAAGAAGGCAACCAGGAACTTCTCTAGGGATAGCATAATAGGGAGAGGAGGATATGGAAATGTGTATAAAGGGTTGCTCCTGGACGGAACCGAAGTTGCATTGAAAAGGTTCAAGAATTGTTCTGCTTCAGGAGATGCAAGTTTCACCCATGAAGTTGAGGTTATTGCAAGCGTCAGGCATGTAAATTTAGTTGCTCTGAGAGGTTATTGTACAGCCACAACTAATTTAGAGGGTCACCAGAGGATTATCGTTTGTGATTTGGTGAAGAATGGGAGTCTTCATGATCATTTATTTGGTTCTACAGGAAAGAAACTCAGCTGGCCAGTCCGTCAACAGATTGCACTGGGCACTGCAAGGGGGCTGGCTTATCTGCACTACGGAGCTCAACCTTCCATTATCCATAGGGATATTAAAGCCAGTAATATCCTTCTGGATGAGAAGTTTGAAGCTAAAGTAGCAGACTTCGGACTTGCAAAGTTCAACCCTGAGGGAATGACGCATATGAGCACGCGTGTAGCTGGAACAATGGGGTATGTAGCACCAGAGTATGCATTGTATGGACAATTGACAGAGAGAAGTGATGTCTTCAGTTATGGTGTTGTGCTTCTTGAGCTTTTGAGCGGGAAGAAGGCTCTTCAGATGAACGAGGATGGCCAGCCCTCATCTTTGAGTGACTTGGCCTGGTCATTGGTCAGGGCAGGTAGAACTTTGGATGTTATTGAAGATGGTATGCCAGAACCGGGTTCGCCAGAAGTGCTTGAGAAGTATGTGTTAATAGCCGTGCTTTGCTCTCACCCTCAGCTATATGCCAGGCCAACCATGGATCAGGTGGTGAAGATGTTGGAGACTGAGCAATCAGTACCCTCCATACCAGAACGACCAATTCCACTCGTTTCTGGAAGGCTTGATATTGAGAGATCTGCTGGTAGCTTTGGCTCTGGTCAGCTCTCTAGTCCGACAGGTTATCGAACATTTGCATTTGAAAGTGAATGCCACTCTTCTAATTCAAAGGAGGAAGAAGGAAGTTCGGACTCTAGAATACTGAGTACATAG 1902 0.4942 MSLFPLFFFSVFLAFPLSSLSANDTGLNAPCPLNFTVLNAVAGGDRPSVDSGTVCEFSRSAIRLVQSDYLRRTGSFLPPLNSSETCWDDFQKFINQYLPNLDVRSACGFQTTWISQGCQNITTKDEFISQIPDSVIQDVRQKCNQSLENNSPCALCTTSLSGMQPFVKGTSVGNVSDCTAYPPIYAAAYVNQAGPADRGTAQCVFLLSFNSPGSNGNKRTIIIVAVVIVCVLALFLVVAGLWLHRRSKGKGMKGISKTEMAVVSGLDSIKESTTLIRFTFDDIKKATRNFSRDSIIGRGGYGNVYKGLLLDGTEVALKRFKNCSASGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVCDLVKNGSLHDHLFGSTGKKLSWPVRQQIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKALQMNEDGQPSSLSDLAWSLVRAGRTLDVIEDGMPEPGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETEQSVPSIPERPIPLVSGRLDIERSAGSFGSGQLSSPTGYRTFAFESECHSSNSKEEEGSSDSRILST 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2260 633 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 371 572 - -
Prci1g2260 633 CDD STKc_IRAK 296 565 - -
Prci1g2260 633 Gene3D Phosphorylase Kinase; domain 1 253 369 - -
Prci1g2260 633 Gene3D Transferase(Phosphotransferase) domain 1 371 573 - -
Prci1g2260 633 ProSiteProfiles Protein kinase domain profile. 290 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2260 633 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 134 628 - -
Prci1g2260 633 MobiDBLite consensus disorder prediction 612 633 - -
Prci1g2260 633 Pfam SPARK 28 165 IPR043891 -
Prci1g2260 633 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Prci1g2260 633 SUPERFAMILY Protein kinase-like (PK-like) 270 565 IPR011009 -
Prci1g2260 633 SMART serkin_6 290 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2260 633 Pfam Protein kinase domain 291 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2260 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Prci1g2260 633 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 252 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2260 Prci-Chr1 43196241 43198498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2260 11 619 Receptor kinase-like Gene Family AT2G48010 63.622 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Prci1g2260 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2260 - - gmx:100800760 861.677